RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TMEM132AQ24JP5 1023 aa15.7■□□□□ 0.1
LIG1-218ENST00000599322 FAM102BQ5T8I3 360 aa15.7■□□□□ 0.1
LIG1-218ENST00000599322 ZBTB8OSQ8IWT0 167 aa15.7■□□□□ 0.1
LIG1-218ENST00000599322 LRRC43Q8N309 656 aa15.7■□□□□ 0.1
LIG1-218ENST00000599322 CNNM3Q8NE01 707 aa15.7■□□□□ 0.1
LIG1-218ENST00000599322 CDK5RAP3Q96JB5 506 aa15.7■□□□□ 0.1
LIG1-218ENST00000599322 NSUN3Q9H649 340 aaKnown RBP15.7■□□□□ 0.1
LIG1-218ENST00000599322 RC3H2Q9HBD1 1191 aaKnown RBP15.7■□□□□ 0.1
LIG1-218ENST00000599322 DNM3Q9UQ16 869 aa15.7■□□□□ 0.1
LIG1-218ENST00000599322 HSP90AA1P07900 732 aaKnown RBP15.69■□□□□ 0.1
LIG1-218ENST00000599322 SPATA31C1P0DKV0 1188 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 FGFR1P11362 822 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 TOB1P50616 345 aaPredicted RBP15.69■□□□□ 0.1
LIG1-218ENST00000599322 KRT17Q04695 432 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 CUL4AQ13619 759 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 PPP2R5AQ15172 486 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 POTEGQ6S5H5 508 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 PADI6Q6TGC4 694 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 GLB1LQ6UWU2 654 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 EP400NLQ6ZTU2 488 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 MAEAQ7L5Y9 396 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 THNSL1Q8IYQ7 743 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 CRIPAKQ8N1N5 446 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 MICAL1Q8TDZ2 1067 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 INTS4Q96HW7 963 aaKnown RBP15.69■□□□□ 0.1
LIG1-218ENST00000599322 IFT74Q96LB3 600 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 TRAIPQ9BWF2 469 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 TRIM6Q9C030 488 aaPredicted RBP15.69■□□□□ 0.1
LIG1-218ENST00000599322 POLR3FQ9H1D9 316 aaPredicted RBP15.69■□□□□ 0.1
LIG1-218ENST00000599322 IFT122Q9HBG6 1241 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.69■□□□□ 0.1
LIG1-218ENST00000599322 AGPAT5Q9NUQ2 364 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 FAM105AQ9NUU6 356 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 KIAA1024Q9UPX6 916 aa15.69■□□□□ 0.1
LIG1-218ENST00000599322 LRRIQ4A6NIV6 560 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 PPM1AP35813 382 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 ARL2P36404 184 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 GATMP50440 423 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 PTENP60484 403 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 UBE3AQ05086 875 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 RNASELQ05823 741 aaKnown RBP15.68■□□□□ 0.1
LIG1-218ENST00000599322 ZRSR1Q15695 479 aaKnown RBP15.68■□□□□ 0.1
LIG1-218ENST00000599322 ARL6IP4Q66PJ3 421 aaKnown RBP15.68■□□□□ 0.1
LIG1-218ENST00000599322 NOTUMQ6P988 496 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 KCTD17Q8N5Z5 321 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 C4orf32Q8N8J7 132 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 URGCPQ8TCY9 931 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 CCDC51Q96ER9 411 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 ZNF558Q96NG5 402 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 C2orf40Q9H1Z8 148 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 ALG13Q9NP73 1137 aaKnown RBP15.68■□□□□ 0.1
LIG1-218ENST00000599322 UBN1Q9NPG3 1134 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 DDX19AQ9NUU7 478 aaKnown RBP15.68■□□□□ 0.1
LIG1-218ENST00000599322 TYW1Q9NV66 732 aaKnown RBP15.68■□□□□ 0.1
LIG1-218ENST00000599322 DAXXQ9UER7 740 aaPredicted RBP15.68■□□□□ 0.1
LIG1-218ENST00000599322 PLAGL2Q9UPG8 496 aa15.68■□□□□ 0.1
LIG1-218ENST00000599322 A0A087WWV3 80 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 K7ELQ4 463 aaPredicted RBP15.67■□□□□ 0.1
LIG1-218ENST00000599322 ZNF623O75123 536 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 CYP11B2P19099 503 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 ALDH7A1P49419 539 aaKnown RBP15.67■□□□□ 0.1
LIG1-218ENST00000599322 HSCBQ8IWL3 235 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 IGSF22Q8N9C0 903 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 KLHL23Q8NBE8 558 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 RASSF8Q8NHQ8 419 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 HELQQ8TDG4 1101 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 KIFAP3Q92845 792 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 FAM193BQ96PV7 902 aaPredicted RBP15.67■□□□□ 0.1
LIG1-218ENST00000599322 NT5C3AQ9H0P0 336 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 XPNPEP1Q9NQW7 623 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 KANSL3Q9P2N6 904 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 KCNG1Q9UIX4 513 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 PCDHB2Q9Y5E7 798 aa15.67■□□□□ 0.1
LIG1-218ENST00000599322 FSD2A1L4K1 749 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 VWA3AA6NCI4 1184 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 GRM6O15303 877 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 UBA7P41226 1012 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 ATP2C1P98194 919 aaPredicted RBP15.66■□□□□ 0.1
LIG1-218ENST00000599322 PDE12Q6L8Q7 609 aaKnown RBP15.66■□□□□ 0.1
LIG1-218ENST00000599322 APBB1IPQ7Z5R6 666 aaPredicted RBP15.66■□□□□ 0.1
LIG1-218ENST00000599322 COLGALT1Q8NBJ5 622 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 DEPTORQ8TB45 409 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 AK8Q96MA6 479 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 CASD1Q96PB1 797 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 NFKBIZQ9BYH8 718 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 PRMT7Q9NVM4 692 aaPredicted RBP15.66■□□□□ 0.1
LIG1-218ENST00000599322 FAM50BQ9Y247 325 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 CNTNAP2Q9UHC6 1331 aa15.66■□□□□ 0.1
LIG1-218ENST00000599322 FGF18O76093 207 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 ITGA4P13612 1032 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 PDIA4P13667 645 aaKnown RBP15.65■□□□□ 0.1
LIG1-218ENST00000599322 GLRA2P23416 452 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 CAPSQ13938 189 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 MAPK6Q16659 721 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 PUS10Q3MIT2 529 aaKnown RBP15.65■□□□□ 0.1
LIG1-218ENST00000599322 TCEAL5Q5H9L2 206 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 NOMO2Q5JPE7 1267 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 KCNT2Q6UVM3 1135 aa15.65■□□□□ 0.1
LIG1-218ENST00000599322 IFNLR1Q8IU57 520 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms