RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 MBTD1Q05BQ5 628 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 CAMK1Q14012 370 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 TFDP1Q14186 410 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 AMHR2Q16671 573 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 PTPROQ16827 1216 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 UBXN11Q5T124 520 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 KRT79Q5XKE5 535 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 TWF2Q6IBS0 349 aaKnown RBP10.77□□□□□ -0.69
VRK3-215ENST00000599138 LRRC55Q6ZSA7 311 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 MRPL10Q7Z7H8 261 aaKnown RBP10.77□□□□□ -0.69
VRK3-215ENST00000599138 MICALL1Q8N3F8 863 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 KCTD17Q8N5Z5 321 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 RSPH1Q8WYR4 309 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 LMAN2LQ9H0V9 348 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 BHMT2Q9H2M3 363 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 CWH43Q9H720 699 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 GPRC5CQ9NQ84 441 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 FAM105AQ9NUU6 356 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 DDX19AQ9NUU7 478 aaKnown RBP10.77□□□□□ -0.69
VRK3-215ENST00000599138 TYW1Q9NV66 732 aaKnown RBP10.77□□□□□ -0.69
VRK3-215ENST00000599138 PLAGL2Q9UPG8 496 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 MTMR6Q9Y217 621 aa10.77□□□□□ -0.69
VRK3-215ENST00000599138 XIRP2A4UGR9 3374 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 VPS37CA5D8V6 355 aaPredicted RBP10.76□□□□□ -0.69
VRK3-215ENST00000599138 VWA3AA6NCI4 1184 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 TSPAN1O60635 241 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 EYA4O95677 639 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 ITGB1P05556 798 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 SKIP12755 728 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 IBSPP21815 317 aaPredicted RBP10.76□□□□□ -0.69
VRK3-215ENST00000599138 AXLP30530 894 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 RESTQ13127 1097 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 TIGD5Q53EQ6 642 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 CDCA2Q69YH5 1023 aaPredicted RBP10.76□□□□□ -0.69
VRK3-215ENST00000599138 KCNK18Q7Z418 384 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 KLHL23Q8NBE8 558 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 SPPL3Q8TCT6 385 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 ATXN2LQ8WWM7 1075 aaKnown RBP10.76□□□□□ -0.69
VRK3-215ENST00000599138 BSNDQ8WZ55 320 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 CCDC51Q96ER9 411 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 PNMA5Q96PV4 448 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 THEGQ9P2T0 379 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 HCSTQ9UBK5 93 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 DNM3Q9UQ16 869 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 PCDHB2Q9Y5E7 798 aa10.76□□□□□ -0.69
VRK3-215ENST00000599138 PLXNA4Q9HCM2 1894 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 MEIS3P2A8K0S8 358 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 E9PMD0 336 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 INO80B-WBP1J3KQ70 363 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 SLC26A4O43511 780 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 DNAJB1P25685 340 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 PTPAQ15257 358 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 SF3A1Q15459 793 aaKnown RBP10.75□□□□□ -0.69
VRK3-215ENST00000599138 FAM187BQ17R55 369 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 TMEM119Q4V9L6 283 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 PPP4R3CPQ6ZMV5 832 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 C1orf186Q6ZWK4 172 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 MAEAQ7L5Y9 396 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 LRRC43Q8N309 656 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 COLGALT1Q8NBJ5 622 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 HELQQ8TDG4 1101 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 AK8Q96MA6 479 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 FZD8Q9H461 694 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 ALG13Q9NP73 1137 aaKnown RBP10.75□□□□□ -0.69
VRK3-215ENST00000599138 AAASQ9NRG9 546 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 COG5Q9UP83 839 aa10.75□□□□□ -0.69
VRK3-215ENST00000599138 MORC2Q9Y6X9 1032 aaPredicted RBP10.75□□□□□ -0.69
VRK3-215ENST00000599138 MYH11P35749 1972 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.74□□□□□ -0.69
VRK3-215ENST00000599138 A0A1B0GUA9 196 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 INPPL1O15357 1258 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 STX6O43752 255 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 OFD1O75665 1012 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 ERLIN2O94905 339 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 ARF4P18085 180 aaPredicted RBP10.74□□□□□ -0.69
VRK3-215ENST00000599138 LAG3P18627 525 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 NCLP19338 710 aaKnown RBP10.74□□□□□ -0.69
VRK3-215ENST00000599138 NAMPTP43490 491 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 MRPS5P82675 430 aaKnown RBP10.74□□□□□ -0.69
VRK3-215ENST00000599138 UBE3AQ05086 875 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 GRIN1Q05586 938 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 CSPP1Q1MSJ5 1256 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 RINT1Q6NUQ1 792 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 NOTUMQ6P988 496 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 AGMOQ6ZNB7 445 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 ABI1Q8IZP0 508 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 DAW1Q8N136 415 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 RNF169Q8NCN4 708 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 SMG8Q8ND04 991 aaKnown RBP10.74□□□□□ -0.69
VRK3-215ENST00000599138 KIFAP3Q92845 792 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 LPPQ93052 612 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 PGBD4Q96DM1 585 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 PRIMPOLQ96LW4 560 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 ASB2Q96Q27 587 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 MRPL9Q9BYD2 267 aaKnown RBP10.74□□□□□ -0.69
VRK3-215ENST00000599138 CCDC113Q9H0I3 377 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 NT5C3AQ9H0P0 336 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 CSRNP2Q9H175 543 aa10.74□□□□□ -0.69
VRK3-215ENST00000599138 NSUN3Q9H649 340 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms