RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 HMGN5P82970 282 aaKnown RBP15.34■□□□□ 0.05
SCAF1-203ENST00000598359 GNL2Q13823 731 aaKnown RBP15.34■□□□□ 0.05
SCAF1-203ENST00000598359 CTC1Q2NKJ3 1217 aa15.34■□□□□ 0.05
SCAF1-203ENST00000598359 RNF149Q8NC42 400 aa15.34■□□□□ 0.05
SCAF1-203ENST00000598359 MICAL1Q8TDZ2 1067 aa15.34■□□□□ 0.05
SCAF1-203ENST00000598359 MTRQ99707 1265 aa15.34■□□□□ 0.05
SCAF1-203ENST00000598359 FOXP1Q9H334 677 aaPredicted RBP15.34■□□□□ 0.05
SCAF1-203ENST00000598359 DACT1Q9NYF0 836 aa15.34■□□□□ 0.05
SCAF1-203ENST00000598359 PI4K2BG5E9Z4 385 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 PER2O15055 1255 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 HOXA2O43364 376 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 MED24O75448 989 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 SPATA31C1P0DKV0 1188 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 LAG3P18627 525 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 TECP42680 631 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 MRE11P49959 708 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 RBM10P98175 930 aaKnown RBP15.33■□□□□ 0.04
SCAF1-203ENST00000598359 RABEP1Q15276 862 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 TTC38Q5R3I4 469 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 KCNT2Q6UVM3 1135 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 FERMT3Q86UX7 667 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 NOSTRINQ8IVI9 506 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 LRRC43Q8N309 656 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 ASAP3Q8TDY4 903 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 TCP11Q8WWU5 503 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 INO80BQ9C086 356 aaPredicted RBP15.33■□□□□ 0.04
SCAF1-203ENST00000598359 CHST12Q9NRB3 414 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 FAM105AQ9NUU6 356 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 INPP5FQ9Y2H2 1132 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 PPME1Q9Y570 386 aa15.33■□□□□ 0.04
SCAF1-203ENST00000598359 NT5C1B-RDH14C9J2C7 533 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 USO1O60763 962 aaKnown RBP15.32■□□□□ 0.04
SCAF1-203ENST00000598359 LYPLA2O95372 231 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 EOMESO95936 686 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 RARRES1P49788 294 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 ADAM15Q13444 863 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 PLPP4Q5VZY2 271 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 MAEAQ7L5Y9 396 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 EXOC8Q8IYI6 725 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 CCDC43Q96MW1 224 aaKnown RBP15.32■□□□□ 0.04
SCAF1-203ENST00000598359 ZNF558Q96NG5 402 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 ANP32EQ9BTT0 268 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 TLR9Q9NR96 1032 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 ANKEF1Q9NU02 776 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 AGPAT5Q9NUQ2 364 aa15.32■□□□□ 0.04
SCAF1-203ENST00000598359 GLP2RO95838 553 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 OR52Z1P0C646 297 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 HOXA11P31270 313 aaPredicted RBP15.31■□□□□ 0.04
SCAF1-203ENST00000598359 NDUFV1P49821 464 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 CAPSQ13938 189 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 UBXN11Q5T124 520 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 POTEGQ6S5H5 508 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 SRGAP1Q7Z6B7 1085 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 CATSPER3Q86XQ3 398 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 FAM178BQ8IXR5 827 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 CPB2Q96IY4 423 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 POLR3FQ9H1D9 316 aaPredicted RBP15.31■□□□□ 0.04
SCAF1-203ENST00000598359 TLE6Q9H808 572 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 GPRC5CQ9NQ84 441 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 PCDHB2Q9Y5E7 798 aa15.31■□□□□ 0.04
SCAF1-203ENST00000598359 HIDE1A8MVS5 230 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 FSCN2O14926 492 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 NCK2O43639 380 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 GAS2O43903 313 aaKnown RBP15.3■□□□□ 0.04
SCAF1-203ENST00000598359 B4GALT3O60512 393 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 GLRA2P23416 452 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 ARL2P36404 184 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 TOB1P50616 345 aaPredicted RBP15.3■□□□□ 0.04
SCAF1-203ENST00000598359 AFF1P51825 1210 aaKnown RBP15.3■□□□□ 0.04
SCAF1-203ENST00000598359 BCAR1P56945 870 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 UBE3AQ05086 875 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 AGMOQ6ZNB7 445 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 TMEM173Q86WV6 379 aaPredicted RBP15.3■□□□□ 0.04
SCAF1-203ENST00000598359 EFHBQ8N7U6 833 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 C4orf32Q8N8J7 132 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 VN1R2Q8NFZ6 395 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 MRPS27Q92552 414 aaKnown RBP15.3■□□□□ 0.04
SCAF1-203ENST00000598359 TMX3Q96JJ7 454 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 TRAIPQ9BWF2 469 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 GBP3Q9H0R5 595 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 ENTPD7Q9NQZ7 604 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 SPG21Q9NZD8 308 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 CLEC1BQ9P126 229 aa15.3■□□□□ 0.04
SCAF1-203ENST00000598359 BARX2Q9UMQ3 279 aaPredicted RBP15.3■□□□□ 0.04
SCAF1-203ENST00000598359 PRR33A8MZF0 331 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 INO80B-WBP1J3KQ70 363 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 ASAP2O43150 1006 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 ST18O60284 1047 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 TSPAN1O60635 241 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 ZC3H11AO75152 810 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCAF1-203ENST00000598359 OFD1O75665 1012 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 DGAT1O75907 488 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 U2AF2P26368 475 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCAF1-203ENST00000598359 SSTR3P32745 418 aaPredicted RBP15.29■□□□□ 0.04
SCAF1-203ENST00000598359 PTENP60484 403 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 PLCB3Q01970 1234 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 ECM1Q16610 540 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 CSPP1Q1MSJ5 1256 aa15.29■□□□□ 0.04
SCAF1-203ENST00000598359 PUS10Q3MIT2 529 aaKnown RBP15.29■□□□□ 0.04
SCAF1-203ENST00000598359 NOMO2Q5JPE7 1267 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms