RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 PPP2R5AQ15172 486 aa13.66□□□□□ -0.22
PDE4C-213ENST00000598111 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
PDE4C-213ENST00000598111 TIGD5Q53EQ6 642 aa13.66□□□□□ -0.22
PDE4C-213ENST00000598111 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
PDE4C-213ENST00000598111 ZBTB8OSQ8IWT0 167 aa13.66□□□□□ -0.22
PDE4C-213ENST00000598111 RASSF8Q8NHQ8 419 aa13.66□□□□□ -0.22
PDE4C-213ENST00000598111 MRPL38Q96DV4 380 aaKnown RBP13.66□□□□□ -0.22
PDE4C-213ENST00000598111 AK8Q96MA6 479 aa13.66□□□□□ -0.22
PDE4C-213ENST00000598111 TRAIPQ9BWF2 469 aa13.66□□□□□ -0.22
PDE4C-213ENST00000598111 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
PDE4C-213ENST00000598111 NT5C3AQ9H0P0 336 aa13.66□□□□□ -0.22
PDE4C-213ENST00000598111 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
PDE4C-213ENST00000598111 CHD9Q3L8U1 2897 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 TDRD15B5MCY1 1934 aaKnown RBP13.65□□□□□ -0.22
PDE4C-213ENST00000598111 TSPAN1O60635 241 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 EYA4O95677 639 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 LINC00271P0C7V0 271 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 ATF7P17544 494 aaPredicted RBP13.65□□□□□ -0.22
PDE4C-213ENST00000598111 LAG3P18627 525 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 AXLP30530 894 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 MBTD1Q05BQ5 628 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 NOTUMQ6P988 496 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 GLB1LQ6UWU2 654 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 DEPTORQ8TB45 409 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 HELQQ8TDG4 1101 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 RSPH1Q8WYR4 309 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 KIFAP3Q92845 792 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 P2RX5Q93086 422 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 CCDC51Q96ER9 411 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 IFT74Q96LB3 600 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 MRPL9Q9BYD2 267 aaKnown RBP13.65□□□□□ -0.22
PDE4C-213ENST00000598111 LMAN2LQ9H0V9 348 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 C2orf40Q9H1Z8 148 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 CHD7Q9P2D1 2997 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 MTMR6Q9Y217 621 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 PCDHB12Q9Y5F1 795 aa13.65□□□□□ -0.22
PDE4C-213ENST00000598111 COL6A3P12111 3177 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 E9PMD0 336 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 CSPG5O95196 566 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
PDE4C-213ENST00000598111 UBA7P41226 1012 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 NAMPTP43490 491 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 CSPP1Q1MSJ5 1256 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 TMEM132AQ24JP5 1023 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 NAALADL2Q58DX5 795 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 CLLU1OSQ5K130 101 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 ZNF598Q86UK7 904 aaKnown RBP13.64□□□□□ -0.23
PDE4C-213ENST00000598111 CABP7Q86V35 215 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 THNSL1Q8IYQ7 743 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 KCTD17Q8N5Z5 321 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 PGBD4Q96DM1 585 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 CALML4Q96GE6 196 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 MMTAG2Q9BU76 263 aaKnown RBP13.64□□□□□ -0.23
PDE4C-213ENST00000598111 TRIM6Q9C030 488 aaPredicted RBP13.64□□□□□ -0.23
PDE4C-213ENST00000598111 ZSCAN16Q9H4T2 348 aaPredicted RBP13.64□□□□□ -0.23
PDE4C-213ENST00000598111 PRDM6Q9NQX0 595 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 TYW1Q9NV66 732 aaKnown RBP13.64□□□□□ -0.23
PDE4C-213ENST00000598111 HCSTQ9UBK5 93 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 PCDHB2Q9Y5E7 798 aa13.64□□□□□ -0.23
PDE4C-213ENST00000598111 GRM6O15303 877 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 SLC26A4O43511 780 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 LONP1P36776 959 aaKnown RBP13.63□□□□□ -0.23
PDE4C-213ENST00000598111 MAPK6Q16659 721 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 LONRF3Q496Y0 759 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 HYIQ5T013 277 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 CDCA2Q69YH5 1023 aaPredicted RBP13.63□□□□□ -0.23
PDE4C-213ENST00000598111 HACE1Q8IYU2 909 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 KLHL23Q8NBE8 558 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 COLGALT1Q8NBJ5 622 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 URGCPQ8TCY9 931 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 BSNDQ8WZ55 320 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 LPPQ93052 612 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 CPB2Q96IY4 423 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 DRC1Q96MC2 740 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 CASD1Q96PB1 797 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 PLIN2Q99541 437 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 PRMT7Q9NVM4 692 aaPredicted RBP13.63□□□□□ -0.23
PDE4C-213ENST00000598111 INPP5FQ9Y2H2 1132 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 CNTNAP2Q9UHC6 1331 aa13.63□□□□□ -0.23
PDE4C-213ENST00000598111 ZNF623O75123 536 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 ITGB1P05556 798 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 PDIA4P13667 645 aaKnown RBP13.62□□□□□ -0.23
PDE4C-213ENST00000598111 ARF4P18085 180 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-213ENST00000598111 LIG1P18858 919 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 HOXA11P31270 313 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-213ENST00000598111 PPM1AP35813 382 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 CEBPZQ03701 1054 aaKnown RBP13.62□□□□□ -0.23
PDE4C-213ENST00000598111 RNASELQ05823 741 aaKnown RBP13.62□□□□□ -0.23
PDE4C-213ENST00000598111 DMP1Q13316 513 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-213ENST00000598111 TMEM119Q4V9L6 283 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 FAM173BQ6P4H8 233 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 CNNM3Q8NE01 707 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 PRIMPOLQ96LW4 560 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 ZNF558Q96NG5 402 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 PNMA5Q96PV4 448 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 TIPINQ9BVW5 301 aa13.62□□□□□ -0.23
PDE4C-213ENST00000598111 CSRNP2Q9H175 543 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms