RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ZBP1Q9H171 429 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 NRDE2Q9H7Z3 1164 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 FAM105AQ9NUU6 356 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 DDX25Q9UHL0 483 aaKnown RBP11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 CYP46A1Q9Y6A2 500 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
CHMP2A-202ENST00000596708 CARNS1A5YM72 827 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 C2CD4DB7Z1M9 353 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 MARCH6O60337 910 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 OFD1O75665 1012 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 GALTP07902 379 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 RAB27AP51159 221 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 GIT2Q14161 759 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 LETM2Q2VYF4 491 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 NOMO2Q5JPE7 1267 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 ATAT1Q5SQI0 421 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 PLA2G4FQ68DD2 849 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 MOXD1Q6UVY6 613 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 B3GNT9Q6UX72 402 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 DDX53Q86TM3 631 aaKnown RBP11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 ETNPPLQ8TBG4 499 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 RSPH1Q8WYR4 309 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 PGBD4Q96DM1 585 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 IGSF21Q96ID5 467 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 AIFM3Q96NN9 605 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 FAM193BQ96PV7 902 aaPredicted RBP11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 TBC1D13Q9NVG8 400 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 FAM86C1Q9NVL1 165 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 DBR1Q9UK59 544 aaKnown RBP11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 SORCS3Q9UPU3 1222 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 TRIOO75962 3097 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 DOCK6Q96HP0 2047 aa11.84□□□□□ -0.51
CHMP2A-202ENST00000596708 WDFY4Q6ZS81 3184 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 CCDC194A0A1B0GVG4 234 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 MEIS3P2A8K0S8 358 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 M0R2N6 131 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 EML1O00423 815 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 DKC1O60832 514 aaKnown RBP eCLIP11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 ZNF623O75123 536 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 PDGFBP01127 241 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 CTSAP10619 480 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 EPCAMP16422 314 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 QARSP47897 775 aaKnown RBP11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 POLGP54098 1239 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 NPEPPSP55786 919 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 MTMR3Q13615 1198 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 GALNT17Q6IS24 598 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 KANK3Q6NY19 840 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 ANO5Q75V66 913 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 KRT25Q7Z3Z0 450 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 TMEM173Q86WV6 379 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 UBALD2Q8IYN6 164 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 DAGLBQ8NCG7 672 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 URGCPQ8TCY9 931 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 ATOH1Q92858 354 aaPredicted RBP11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 MBOAT7Q96N66 472 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 TRAIPQ9BWF2 469 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 IRF2BPLQ9H1B7 796 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 DZANK1Q9NVP4 752 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 DNAJB4Q9UDY4 337 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 KCNJ14Q9UNX9 436 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 PCDHB2Q9Y5E7 798 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 COL4A3BPQ9Y5P4 624 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 TRIP11Q15643 1979 aa11.83□□□□□ -0.52
CHMP2A-202ENST00000596708 DOCK8Q8NF50 2099 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 SLC37A4O43826 429 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 ALDH2P05091 517 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 SSBP05455 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 P4HBP07237 508 aaKnown RBP11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 ASGR2P07307 311 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 SRGAP2CP0DJJ0 459 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 SLC11A1P49279 550 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 KIAA1841Q6NSI8 718 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 TMC5Q6UXY8 1006 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 SRGAP1Q7Z6B7 1085 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 CABP7Q86V35 215 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 PPFIBP1Q86W92 1011 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 ZNF280BQ86YH2 543 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 EXOC8Q8IYI6 725 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 PLCD3Q8N3E9 789 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 TDRD5Q8NAT2 981 aaKnown RBP11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 SLC7A3Q8WY07 619 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 IFT122Q9HBG6 1241 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 BMP2KQ9NSY1 1161 aaPredicted RBP11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 LIMD1Q9UGP4 676 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 FAN1Q9Y2M0 1017 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 IRAK3Q9Y616 596 aa11.82□□□□□ -0.52
CHMP2A-202ENST00000596708 H0Y858 1186 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 CCNT1O60563 726 aaKnown RBP11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 DDHD2O94830 711 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 BRD1O95696 1058 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 XBP1P17861 261 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 KLRC2P26717 231 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 PPP2R5CQ13362 524 aa11.81□□□□□ -0.52
CHMP2A-202ENST00000596708 NPY5RQ15761 445 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms