RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 DRC1Q96MC2 740 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 FAM161BQ96MY7 647 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 CDX2Q99626 313 aaPredicted RBP20.2■□□□□ 0.82
ZNF558-204ENST00000596172 C2orf40Q9H1Z8 148 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 BLOC1S4Q9NUP1 217 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 KCNG1Q9UIX4 513 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 RCOR1Q9UKL0 485 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 PIN4Q9Y237 131 aaKnown RBP20.2■□□□□ 0.82
ZNF558-204ENST00000596172 CHD7Q9P2D1 2997 aa20.2■□□□□ 0.82
ZNF558-204ENST00000596172 LRRIQ4A6NIV6 560 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 INO80B-WBP1J3KQ70 363 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 ZNF623O75123 536 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 ERVK-21P61565 698 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
ZNF558-204ENST00000596172 AMHR2Q16671 573 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 FAM187BQ17R55 369 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 SPECC1Q5M775 1068 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 ZNF598Q86UK7 904 aaKnown RBP20.19■□□□□ 0.82
ZNF558-204ENST00000596172 ZBTB8OSQ8IWT0 167 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 CMTR2Q8IYT2 770 aaKnown RBP20.19■□□□□ 0.82
ZNF558-204ENST00000596172 DAW1Q8N136 415 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 RASSF8Q8NHQ8 419 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 LRRC15Q8TF66 581 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 BSNDQ8WZ55 320 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 RAD54LQ92698 747 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 TGS1Q96RS0 853 aaKnown RBP20.19■□□□□ 0.82
ZNF558-204ENST00000596172 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
ZNF558-204ENST00000596172 ATP6V1DQ9Y5K8 247 aa20.19■□□□□ 0.82
ZNF558-204ENST00000596172 CUTAO60888 179 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 HIP1RO75146 1068 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 ERLIN2O94905 339 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 SLC34A2O95436 690 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 SSBP05455 408 aaKnown RBP eCLIP20.18■□□□□ 0.82
ZNF558-204ENST00000596172 DNM1Q05193 864 aaKnown RBP20.18■□□□□ 0.82
ZNF558-204ENST00000596172 MAPK7Q13164 816 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 FOXD4L6Q3SYB3 417 aaPredicted RBP20.18■□□□□ 0.82
ZNF558-204ENST00000596172 ARSHQ5FYA8 562 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 TWF2Q6IBS0 349 aaKnown RBP20.18■□□□□ 0.82
ZNF558-204ENST00000596172 FOXD4L3Q6VB84 417 aaPredicted RBP20.18■□□□□ 0.82
ZNF558-204ENST00000596172 CCDC51Q96ER9 411 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 PRIMPOLQ96LW4 560 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 SAMD11Q96NU1 681 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 NTPCRQ9BSD7 190 aaKnown RBP20.18■□□□□ 0.82
ZNF558-204ENST00000596172 FZD8Q9H461 694 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 PRMT7Q9NVM4 692 aaPredicted RBP20.18■□□□□ 0.82
ZNF558-204ENST00000596172 STK17AQ9UEE5 414 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 ADGRA3Q8IWK6 1321 aa20.18■□□□□ 0.82
ZNF558-204ENST00000596172 HOXA2O43364 376 aa20.17■□□□□ 0.82
ZNF558-204ENST00000596172 TSPAN1O60635 241 aa20.17■□□□□ 0.82
ZNF558-204ENST00000596172 RAB27AP51159 221 aa20.17■□□□□ 0.82
ZNF558-204ENST00000596172 EFNA5P52803 228 aa20.17■□□□□ 0.82
ZNF558-204ENST00000596172 AXDND1Q5T1B0 1012 aaPredicted RBP20.17■□□□□ 0.82
ZNF558-204ENST00000596172 CCDC73Q6ZRK6 1079 aa20.17■□□□□ 0.82
ZNF558-204ENST00000596172 FIBCD1Q8N539 461 aa20.17■□□□□ 0.82
ZNF558-204ENST00000596172 DEPTORQ8TB45 409 aa20.17■□□□□ 0.82
ZNF558-204ENST00000596172 RSPH1Q8WYR4 309 aa20.17■□□□□ 0.82
ZNF558-204ENST00000596172 LARP4BQ92615 738 aaKnown RBP20.17■□□□□ 0.82
ZNF558-204ENST00000596172 CLP1Q92989 425 aaKnown RBP20.17■□□□□ 0.82
ZNF558-204ENST00000596172 STXBP5LQ9Y2K9 1186 aa20.17■□□□□ 0.82
ZNF558-204ENST00000596172 GBF1Q92538 1859 aa20.16■□□□□ 0.82
ZNF558-204ENST00000596172 NUCB2P80303 420 aa20.16■□□□□ 0.82
ZNF558-204ENST00000596172 BTG3Q14201 252 aaPredicted RBP20.16■□□□□ 0.82
ZNF558-204ENST00000596172 RRAGBQ5VZM2 374 aa20.16■□□□□ 0.82
ZNF558-204ENST00000596172 NOTUMQ6P988 496 aa20.16■□□□□ 0.82
ZNF558-204ENST00000596172 CCDC113Q9H0I3 377 aa20.16■□□□□ 0.82
ZNF558-204ENST00000596172 POLD4Q9HCU8 107 aa20.16■□□□□ 0.82
ZNF558-204ENST00000596172 FAM105AQ9NUU6 356 aa20.16■□□□□ 0.82
ZNF558-204ENST00000596172 ODF2LQ9ULJ1 636 aa20.16■□□□□ 0.82
ZNF558-204ENST00000596172 RBM19Q9Y4C8 960 aaKnown RBP20.16■□□□□ 0.82
ZNF558-204ENST00000596172 A0A1B0GUA9 196 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 LINC00271P0C7V0 271 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 ATF7P17544 494 aaPredicted RBP20.15■□□□□ 0.82
ZNF558-204ENST00000596172 ARF4P18085 180 aaPredicted RBP20.15■□□□□ 0.82
ZNF558-204ENST00000596172 NPTX2P47972 431 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 KRT85P78386 507 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 DMP1Q13316 513 aaPredicted RBP20.15■□□□□ 0.82
ZNF558-204ENST00000596172 MCM6Q14566 821 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 MAPK6Q16659 721 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 NAALADL2Q58DX5 795 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 UBXN11Q5T124 520 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 MRPL10Q7Z7H8 261 aaKnown RBP20.15■□□□□ 0.82
ZNF558-204ENST00000596172 GPBP1Q86WP2 473 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 SPIRE2Q8WWL2 714 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 TMEM117Q9H0C3 514 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 PRDM12Q9H4Q4 367 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 RNF19AQ9NV58 838 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 RWDD3Q9Y3V2 267 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 PHLPP2Q6ZVD8 1323 aa20.15■□□□□ 0.82
ZNF558-204ENST00000596172 CDH23Q9H251 3354 aa20.14■□□□□ 0.82
ZNF558-204ENST00000596172 ACKR2O00590 384 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 PLS3P13797 630 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 POU3F3P20264 500 aaPredicted RBP20.14■□□□□ 0.81
ZNF558-204ENST00000596172 ME1P48163 572 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 PEX3P56589 373 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 CNNM3Q8NE01 707 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 MYLIPQ8WY64 445 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 ARNTL2Q8WYA1 636 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 KCNN1Q92952 543 aa20.14■□□□□ 0.81
ZNF558-204ENST00000596172 PGBD4Q96DM1 585 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms