RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 MCPH1Q8NEM0 835 aa14.51□□□□□ -0.09
USE1-207ENST00000596136 ASAP3Q8TDY4 903 aa14.51□□□□□ -0.09
USE1-207ENST00000596136 SYMPKQ92797 1274 aaKnown RBP14.51□□□□□ -0.09
USE1-207ENST00000596136 HLA-CQ95604 372 aa14.51□□□□□ -0.09
USE1-207ENST00000596136 INTS4Q96HW7 963 aaKnown RBP14.51□□□□□ -0.09
USE1-207ENST00000596136 RAB34Q9BZG1 259 aa14.51□□□□□ -0.09
USE1-207ENST00000596136 NSUN3Q9H649 340 aaKnown RBP14.51□□□□□ -0.09
USE1-207ENST00000596136 PIN4Q9Y237 131 aaKnown RBP14.51□□□□□ -0.09
USE1-207ENST00000596136 BMP1P13497 986 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 CYP11B2P19099 503 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 DNAJB1P25685 340 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 AXLP30530 894 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 TFF2Q03403 129 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 UBE3AQ05086 875 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 CAPSQ13938 189 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 AMHR2Q16671 573 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 CSPP1Q1MSJ5 1256 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 UBXN11Q5T124 520 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 ARL6IP4Q66PJ3 421 aaKnown RBP14.5□□□□□ -0.09
USE1-207ENST00000596136 TWF2Q6IBS0 349 aaKnown RBP14.5□□□□□ -0.09
USE1-207ENST00000596136 DTHD1Q6ZMT9 781 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 COLGALT1Q8NBJ5 622 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 CCDC43Q96MW1 224 aaKnown RBP14.5□□□□□ -0.09
USE1-207ENST00000596136 ALG13Q9NP73 1137 aaKnown RBP14.5□□□□□ -0.09
USE1-207ENST00000596136 AAASQ9NRG9 546 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 FAM105AQ9NUU6 356 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 PCDHB12Q9Y5F1 795 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 GTF3C3Q9Y5Q9 886 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 MUC3AQ02505 3323 aa14.5□□□□□ -0.09
USE1-207ENST00000596136 PLXNA4Q9HCM2 1894 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 USO1O60763 962 aaKnown RBP14.49□□□□□ -0.09
USE1-207ENST00000596136 LAG3P18627 525 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 IBSPP21815 317 aaPredicted RBP14.49□□□□□ -0.09
USE1-207ENST00000596136 CCT6AP40227 531 aaKnown RBP14.49□□□□□ -0.09
USE1-207ENST00000596136 PLCB3Q01970 1234 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 MBTD1Q05BQ5 628 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 TCEAL5Q5H9L2 206 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 PADI6Q6TGC4 694 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 BRAPQ7Z569 592 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 LRRC43Q8N309 656 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 KCTD17Q8N5Z5 321 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 MMTAG2Q9BU76 263 aaKnown RBP14.49□□□□□ -0.09
USE1-207ENST00000596136 POLR3FQ9H1D9 316 aaPredicted RBP14.49□□□□□ -0.09
USE1-207ENST00000596136 HCSTQ9UBK5 93 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 KIAA1024Q9UPX6 916 aa14.49□□□□□ -0.09
USE1-207ENST00000596136 ARHGEF35A5YM69 484 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 NCK2O43639 380 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 TSPAN1O60635 241 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 PDCP20941 246 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 CTC1Q2NKJ3 1217 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 HYIQ5T013 277 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 KRT79Q5XKE5 535 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 CDCA2Q69YH5 1023 aaPredicted RBP14.48□□□□□ -0.09
USE1-207ENST00000596136 ABI1Q8IZP0 508 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 HELQQ8TDG4 1101 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 SNX29Q8TEQ0 813 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 POF1BQ8WVV4 589 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 PGBD4Q96DM1 585 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 CCDC51Q96ER9 411 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 MRPL9Q9BYD2 267 aaKnown RBP14.48□□□□□ -0.09
USE1-207ENST00000596136 UBE2ZQ9H832 354 aaPredicted RBP14.48□□□□□ -0.09
USE1-207ENST00000596136 GPRC5CQ9NQ84 441 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 LZTS1Q9Y250 596 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 PCDHB2Q9Y5E7 798 aa14.48□□□□□ -0.09
USE1-207ENST00000596136 BDP1A6H8Y1 2624 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 MEIS3P2A8K0S8 358 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 PP2D1A8MPX8 630 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 OFD1O75665 1012 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 FGF18O76093 207 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 ERLIN2O94905 339 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 EYA4O95677 639 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 NCLP19338 710 aaKnown RBP14.47□□□□□ -0.09
USE1-207ENST00000596136 FAM187BQ17R55 369 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 SPOUT1Q5T280 376 aaKnown RBP14.47□□□□□ -0.09
USE1-207ENST00000596136 NOTUMQ6P988 496 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 KCNT2Q6UVM3 1135 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 PPP4R3CPQ6ZMV5 832 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 AGMOQ6ZNB7 445 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 RNF169Q8NCN4 708 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 CNNM3Q8NE01 707 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 SNX21Q969T3 373 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 PABPC5Q96DU9 382 aaKnown RBP14.47□□□□□ -0.09
USE1-207ENST00000596136 BHMT2Q9H2M3 363 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 FZD8Q9H461 694 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 DDX19AQ9NUU7 478 aaKnown RBP14.47□□□□□ -0.09
USE1-207ENST00000596136 DNM3Q9UQ16 869 aa14.47□□□□□ -0.09
USE1-207ENST00000596136 CNTNAP2Q9UHC6 1331 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 TCF20Q9UGU0 1960 aaKnown RBP14.46□□□□□ -0.09
USE1-207ENST00000596136 A0A1B0GUA9 196 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 CARNS1A5YM72 827 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 INO80B-WBP1J3KQ70 363 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 K7ELQ4 463 aaPredicted RBP14.46□□□□□ -0.09
USE1-207ENST00000596136 INPPL1O15357 1258 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 SLC26A4O43511 780 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 BMP15O95972 392 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 ARF4P18085 180 aaPredicted RBP14.46□□□□□ -0.09
USE1-207ENST00000596136 SYT1P21579 422 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 CDC25AP30304 524 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 PPM1AP35813 382 aa14.46□□□□□ -0.09
USE1-207ENST00000596136 NCBP1Q09161 790 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms