RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 ST18O60284 1047 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 ATP2B1P20020 1258 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 KRT17Q04695 432 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 NOSTRINQ8IVI9 506 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 HELQQ8TDG4 1101 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 MICAL1Q8TDZ2 1067 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 PGBD4Q96DM1 585 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 CDCA3Q99618 268 aaPredicted RBP28.29■■■□□ 2.12
ZNF558-203ENST00000595786 XPNPEP1Q9NQW7 623 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 SPG21Q9NZD8 308 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 PRKAG3Q9UGI9 489 aa28.29■■■□□ 2.12
ZNF558-203ENST00000595786 ARID2Q68CP9 1835 aa28.28■■■□□ 2.12
ZNF558-203ENST00000595786 FSCN2O14926 492 aa28.28■■■□□ 2.12
ZNF558-203ENST00000595786 IL9P15248 144 aa28.28■■■□□ 2.12
ZNF558-203ENST00000595786 RARRES1P49788 294 aa28.28■■■□□ 2.12
ZNF558-203ENST00000595786 GNL2Q13823 731 aaKnown RBP28.28■■■□□ 2.12
ZNF558-203ENST00000595786 TFDP1Q14186 410 aa28.28■■■□□ 2.12
ZNF558-203ENST00000595786 IFNLR1Q8IU57 520 aaPredicted RBP28.28■■■□□ 2.12
ZNF558-203ENST00000595786 RNF149Q8NC42 400 aa28.28■■■□□ 2.12
ZNF558-203ENST00000595786 CCDC43Q96MW1 224 aaKnown RBP28.28■■■□□ 2.12
ZNF558-203ENST00000595786 POLR3CQ9BUI4 534 aaPredicted RBP28.28■■■□□ 2.12
ZNF558-203ENST00000595786 NGRNQ9NPE2 291 aaKnown RBP28.28■■■□□ 2.12
ZNF558-203ENST00000595786 OR52Z1P0C646 297 aa28.27■■■□□ 2.12
ZNF558-203ENST00000595786 AXLP30530 894 aa28.27■■■□□ 2.12
ZNF558-203ENST00000595786 GTF2F1P35269 517 aaKnown RBP eCLIP28.27■■■□□ 2.12
ZNF558-203ENST00000595786 PTENP60484 403 aa28.27■■■□□ 2.12
ZNF558-203ENST00000595786 MRPL10Q7Z7H8 261 aaKnown RBP28.27■■■□□ 2.12
ZNF558-203ENST00000595786 ADGRD2Q7Z7M1 963 aa28.27■■■□□ 2.12
ZNF558-203ENST00000595786 C1QTNF1Q9BXJ1 281 aa28.27■■■□□ 2.12
ZNF558-203ENST00000595786 TLE6Q9H808 572 aa28.27■■■□□ 2.12
ZNF558-203ENST00000595786 MINDY3Q9H8M7 445 aa28.27■■■□□ 2.12
ZNF558-203ENST00000595786 UPF2Q9HAU5 1272 aaKnown RBP28.27■■■□□ 2.12
ZNF558-203ENST00000595786 NOL7Q9UMY1 257 aaKnown RBP28.27■■■□□ 2.12
ZNF558-203ENST00000595786 KIF3AQ9Y496 699 aa28.27■■■□□ 2.12
ZNF558-203ENST00000595786 POTEMA6NI47 508 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 CSPG5O95196 566 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 SPATA31C1P0DKV0 1188 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 U2AF2P26368 475 aaKnown RBP eCLIP28.26■■■□□ 2.11
ZNF558-203ENST00000595786 HOXA11P31270 313 aaPredicted RBP28.26■■■□□ 2.11
ZNF558-203ENST00000595786 ARL2P36404 184 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 NRIP1P48552 1158 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 ERVFC1P60507 584 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 DLX2Q07687 328 aaPredicted RBP28.26■■■□□ 2.11
ZNF558-203ENST00000595786 ZNF174Q15697 407 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 TTC38Q5R3I4 469 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 GLB1LQ6UWU2 654 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 GJD3Q8N144 294 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 ERMNQ8TAM6 284 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 NFKBIZQ9BYH8 718 aa28.26■■■□□ 2.11
ZNF558-203ENST00000595786 BMP2KQ9NSY1 1161 aaPredicted RBP28.26■■■□□ 2.11
ZNF558-203ENST00000595786 DBR1Q9UK59 544 aaKnown RBP28.26■■■□□ 2.11
ZNF558-203ENST00000595786 MUTP22033 750 aa28.25■■■□□ 2.11
ZNF558-203ENST00000595786 ALDH7A1P49419 539 aaKnown RBP28.25■■■□□ 2.11
ZNF558-203ENST00000595786 NCBP1Q09161 790 aaKnown RBP28.25■■■□□ 2.11
ZNF558-203ENST00000595786 CATSPER3Q86XQ3 398 aa28.25■■■□□ 2.11
ZNF558-203ENST00000595786 SLC39A11Q8N1S5 342 aa28.25■■■□□ 2.11
ZNF558-203ENST00000595786 CNNM3Q8NE01 707 aa28.25■■■□□ 2.11
ZNF558-203ENST00000595786 MSLNLQ96KJ4 702 aa28.25■■■□□ 2.11
ZNF558-203ENST00000595786 NACC1Q96RE7 527 aa28.25■■■□□ 2.11
ZNF558-203ENST00000595786 CD207Q9UJ71 328 aa28.25■■■□□ 2.11
ZNF558-203ENST00000595786 PCDHB2Q9Y5E7 798 aa28.25■■■□□ 2.11
ZNF558-203ENST00000595786 LINC01565O15544 149 aa28.24■■■□□ 2.11
ZNF558-203ENST00000595786 TBX10O75333 385 aa28.24■■■□□ 2.11
ZNF558-203ENST00000595786 RPA1P27694 616 aa28.24■■■□□ 2.11
ZNF558-203ENST00000595786 TECP42680 631 aa28.24■■■□□ 2.11
ZNF558-203ENST00000595786 NDUFV1P49821 464 aa28.24■■■□□ 2.11
ZNF558-203ENST00000595786 SMAD4Q13485 552 aaKnown RBP28.24■■■□□ 2.11
ZNF558-203ENST00000595786 SMAD2Q15796 467 aaKnown RBP28.24■■■□□ 2.11
ZNF558-203ENST00000595786 NOMO2Q5JPE7 1267 aa28.24■■■□□ 2.11
ZNF558-203ENST00000595786 PIGOQ8TEQ8 1089 aa28.24■■■□□ 2.11
ZNF558-203ENST00000595786 CCDC51Q96ER9 411 aa28.24■■■□□ 2.11
ZNF558-203ENST00000595786 CNTNAP2Q9UHC6 1331 aa28.23■■■□□ 2.11
ZNF558-203ENST00000595786 MBTPS2O43462 519 aa28.23■■■□□ 2.11
ZNF558-203ENST00000595786 OFD1O75665 1012 aa28.23■■■□□ 2.11
ZNF558-203ENST00000595786 ERLIN2O94905 339 aa28.23■■■□□ 2.11
ZNF558-203ENST00000595786 EYA4O95677 639 aa28.23■■■□□ 2.11
ZNF558-203ENST00000595786 DUSP6Q16828 381 aa28.23■■■□□ 2.11
ZNF558-203ENST00000595786 RBM23Q86U06 439 aaKnown RBP28.23■■■□□ 2.11
ZNF558-203ENST00000595786 CD320Q9NPF0 282 aa28.23■■■□□ 2.11
ZNF558-203ENST00000595786 BCAR1P56945 870 aa28.22■■■□□ 2.11
ZNF558-203ENST00000595786 COASYQ13057 564 aa28.22■■■□□ 2.11
ZNF558-203ENST00000595786 MCPH1Q8NEM0 835 aa28.22■■■□□ 2.11
ZNF558-203ENST00000595786 LPPQ93052 612 aa28.22■■■□□ 2.11
ZNF558-203ENST00000595786 UBN1Q9NPG3 1134 aa28.22■■■□□ 2.11
ZNF558-203ENST00000595786 CLEC1BQ9P126 229 aa28.22■■■□□ 2.11
ZNF558-203ENST00000595786 KANSL3Q9P2N6 904 aa28.22■■■□□ 2.11
ZNF558-203ENST00000595786 PCDHGC5Q9Y5F6 944 aa28.22■■■□□ 2.11
ZNF558-203ENST00000595786 STK24Q9Y6E0 443 aa28.22■■■□□ 2.11
ZNF558-203ENST00000595786 MED24O75448 989 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 MCM2P49736 904 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 FXR2P51116 673 aaKnown RBP eCLIP28.21■■■□□ 2.11
ZNF558-203ENST00000595786 PDIA5Q14554 519 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 BMS1Q14692 1282 aaKnown RBP28.21■■■□□ 2.11
ZNF558-203ENST00000595786 UBXN11Q5T124 520 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 NOTUMQ6P988 496 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 TMEM184AQ6ZMB5 413 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 ADHFE1Q8IWW8 467 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 C4orf32Q8N8J7 132 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 ASAP3Q8TDY4 903 aa28.21■■■□□ 2.11
ZNF558-203ENST00000595786 TCF25Q9BQ70 676 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms