RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 K7ESF4 209 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 C2CD2LO14523 706 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 ATXN7O15265 892 aaPredicted RBP13.58□□□□□ -0.24
ZNF558-202ENST00000593891 IPO8O15397 1037 aaKnown RBP13.58□□□□□ -0.24
ZNF558-202ENST00000593891 RPP40O75818 363 aaKnown RBP13.58□□□□□ -0.24
ZNF558-202ENST00000593891 GALTP07902 379 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 GOLGA8HP0CJ92 632 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 HOXA13P31271 388 aaPredicted RBP13.58□□□□□ -0.24
ZNF558-202ENST00000593891 GHRHRQ02643 423 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 KCNC4Q03721 635 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 SRSF1Q07955 248 aaKnown RBP eCLIP13.58□□□□□ -0.24
ZNF558-202ENST00000593891 QRICH1Q2TAL8 776 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 KBTBD6Q86V97 674 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 ZNF843Q8N446 348 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
ZNF558-202ENST00000593891 GAB3Q8WWW8 586 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 FAM3CQ92520 227 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 DNASE1L2Q92874 299 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 FGF13Q92913 245 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 CPVLQ9H3G5 476 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 GREB1Q4ZG55 1949 aa13.58□□□□□ -0.24
ZNF558-202ENST00000593891 CAPN8A6NHC0 703 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 DHX16O60231 1041 aaKnown RBP13.57□□□□□ -0.24
ZNF558-202ENST00000593891 URODP06132 367 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 SPATA31D3P0C874 917 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 CCDC192P0DO97 292 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 SNHG28P0DPA3 235 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 HOXA6P31267 233 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 SIM1P81133 766 aaPredicted RBP13.57□□□□□ -0.24
ZNF558-202ENST00000593891 SEMA3FQ13275 785 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 PLCB4Q15147 1175 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 SPATA31D4Q6ZUB0 917 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 FAM228AQ86W67 206 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 ADGRF4Q8IZF3 695 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 ZNF710Q8N1W2 664 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 LSM14AQ8ND56 463 aaKnown RBP13.57□□□□□ -0.24
ZNF558-202ENST00000593891 VN1R3Q9BXE9 311 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 MRS2Q9HD23 443 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 RTEL1Q9NZ71 1219 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 KAT6AQ92794 2004 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 LAMA4Q16363 1823 aa13.57□□□□□ -0.24
ZNF558-202ENST00000593891 PTPN13Q12923 2485 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 DOCK8Q8NF50 2099 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 TEX28O15482 410 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 GAS2O43903 313 aaKnown RBP13.56□□□□□ -0.24
ZNF558-202ENST00000593891 CRYBB1P53674 252 aaPredicted RBP13.56□□□□□ -0.24
ZNF558-202ENST00000593891 UAP1L1Q3KQV9 507 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 MTHFD1LQ6UB35 978 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 FCHSD1Q86WN1 690 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 CHCHD4Q8N4Q1 142 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 TRAPPC12Q8WVT3 735 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 RPS6KC1Q96S38 1066 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 SDK1Q7Z5N4 2213 aa13.56□□□□□ -0.24
ZNF558-202ENST00000593891 TEP1Q99973 2627 aaKnown RBP13.56□□□□□ -0.24
ZNF558-202ENST00000593891 GSTTP1A0A1W2PQM5 241 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 GCOM1H8Y6P7 765 aaPredicted RBP13.55□□□□□ -0.24
ZNF558-202ENST00000593891 CAVIN2O95810 425 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 C1RP00736 705 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 POLR2MP0CAP2 368 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 MRPS9P82933 396 aaKnown RBP13.55□□□□□ -0.24
ZNF558-202ENST00000593891 RNASELQ05823 741 aaKnown RBP13.55□□□□□ -0.24
ZNF558-202ENST00000593891 CTDSPL2Q05D32 466 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 SLFN5Q08AF3 891 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 GAS6Q14393 721 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 GRASPQ7Z6J2 395 aaPredicted RBP13.55□□□□□ -0.24
ZNF558-202ENST00000593891 TTC14Q96N46 770 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 AMNQ9BXJ7 453 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 AZI2Q9H6S1 392 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 NRDE2Q9H7Z3 1164 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 TOMM22Q9NS69 142 aa13.55□□□□□ -0.24
ZNF558-202ENST00000593891 CFAP46Q8IYW2 2715 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
ZNF558-202ENST00000593891 A0A0U1RQF3 1178 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 SPAARA0A1B0GVQ0 90 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 LNP1A1A4G5 178 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 CAPN9O14815 690 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 OPLAHO14841 1288 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 ECI2O75521 394 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 CHRNB1P11230 501 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 LRRC32Q14392 662 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 KIZQ2M2Z5 673 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 RRP12Q5JTH9 1297 aaKnown RBP13.54□□□□□ -0.24
ZNF558-202ENST00000593891 NLRX1Q86UT6 975 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 PALB2Q86YC2 1186 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 KIAA0319LQ8IZA0 1049 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 ZC3H10Q96K80 434 aaKnown RBP13.54□□□□□ -0.24
ZNF558-202ENST00000593891 OSMRQ99650 979 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 VAT1LQ9HCJ6 419 aa13.54□□□□□ -0.24
ZNF558-202ENST00000593891 KHNYNO15037 678 aaKnown RBP13.53□□□□□ -0.24
ZNF558-202ENST00000593891 RNF113AO15541 343 aaKnown RBP13.53□□□□□ -0.24
ZNF558-202ENST00000593891 ORC4O43929 436 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 AKAP3O75969 853 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 TRIM27P14373 513 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 KLRC1P26715 233 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 SLC11A1P49279 550 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 CREB5Q02930 508 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 PTGDRQ13258 359 aa13.53□□□□□ -0.24
ZNF558-202ENST00000593891 ZNF598Q86UK7 904 aaKnown RBP13.53□□□□□ -0.24
ZNF558-202ENST00000593891 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms