RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 MOV10L1Q9BXT6 1211 aaKnown RBP8.89□□□□□ -0.99
VMP1-213ENST00000591877 USP26Q9BXU7 913 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 WNT10AQ9GZT5 417 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 HOXC10Q9NYD6 342 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 PLXNA1Q9UIW2 1896 aa8.89□□□□□ -0.99
VMP1-213ENST00000591877 SLC15A5A6NIM6 579 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 B2RBV5 119 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 WDR46O15213 610 aaKnown RBP8.88□□□□□ -0.99
VMP1-213ENST00000591877 FANCGO15287 622 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 ADAM11O75078 769 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 IGHDP01880 384 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 PGRP06401 933 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 CENPBP07199 599 aaPredicted RBP8.88□□□□□ -0.99
VMP1-213ENST00000591877 HOXC6P09630 235 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 ZKSCAN1P17029 563 aaPredicted RBP8.88□□□□□ -0.99
VMP1-213ENST00000591877 GNAT2P19087 354 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 CCND3P30281 292 aaPredicted RBP8.88□□□□□ -0.99
VMP1-213ENST00000591877 PREPP48147 710 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 ZNF143P52747 638 aaPredicted RBP8.88□□□□□ -0.99
VMP1-213ENST00000591877 PDE1AP54750 535 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 ANAPC15P60006 121 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 CCNA1P78396 465 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 GRB14Q14449 540 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 TCEA2Q15560 299 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 BBS9Q3SYG4 887 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 CCDC129Q6ZRS4 1044 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 CCAR1Q8IX12 1150 aaKnown RBP8.88□□□□□ -0.99
VMP1-213ENST00000591877 SMC5Q8IY18 1101 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 SLFN12Q8IYM2 578 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 ZSWIM2Q8NEG5 633 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 EXOC6Q8TAG9 804 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 PAWRQ96IZ0 340 aaKnown RBP8.88□□□□□ -0.99
VMP1-213ENST00000591877 SLC9A7Q96T83 725 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 APBA2Q99767 749 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 SPATC1LQ9H0A9 340 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 SH2D4AQ9H788 454 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 FBXO28Q9NVF7 368 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 OGDHLQ9ULD0 1010 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 ADAMTS5Q9UNA0 930 aa8.88□□□□□ -0.99
VMP1-213ENST00000591877 DNAJA2O60884 412 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 PRDM1O75626 825 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 FLOT1O75955 427 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 APPP05067 770 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 CAPN2P17655 700 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 LIG1P18858 919 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 TDO2P48775 406 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 YARSP54577 528 aaKnown RBP8.87□□□□□ -0.99
VMP1-213ENST00000591877 TMEM132BQ14DG7 1078 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 HABP4Q5JVS0 413 aaKnown RBP8.87□□□□□ -0.99
VMP1-213ENST00000591877 FAM83BQ5T0W9 1011 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 WDR78Q5VTH9 848 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 SPATC1Q76KD6 591 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 SHCBP1Q8NEM2 672 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 REPS2Q8NFH8 660 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 DPF3Q92784 378 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 WDR89Q96FK6 387 aaPredicted RBP8.87□□□□□ -0.99
VMP1-213ENST00000591877 NUP88Q99567 741 aaPredicted RBP8.87□□□□□ -0.99
VMP1-213ENST00000591877 MKNK2Q9HBH9 465 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 PCDH12Q9NPG4 1184 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 NYAP2Q9P242 653 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 CCDC39Q9UFE4 941 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 ZNF214Q9UL59 606 aaPredicted RBP8.87□□□□□ -0.99
VMP1-213ENST00000591877 PLAAQ9Y263 795 aa8.87□□□□□ -0.99
VMP1-213ENST00000591877 PRAMEF27A3QJZ7 478 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 DCDC2CA8MYV0 355 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 F5H6K3 240 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 ADORA2AP29274 412 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 CYP2C19P33261 490 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 GYS2P54840 703 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 NLRP12P59046 1061 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 ID3Q02535 119 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 KLRC3Q07444 240 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 PPARAQ07869 468 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 TMEM67Q5HYA8 995 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 ZBTB37Q5TC79 503 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 VPS53Q5VIR6 699 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 CBLL1Q75N03 491 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 MCATQ8IVS2 390 aaKnown RBP8.86□□□□□ -0.99
VMP1-213ENST00000591877 LRRC47Q8N1G4 583 aaKnown RBP8.86□□□□□ -0.99
VMP1-213ENST00000591877 MB21D1Q8N884 522 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 TRPV1Q8NER1 839 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 ACSF2Q96CM8 615 aaPredicted RBP8.86□□□□□ -0.99
VMP1-213ENST00000591877 EVI5LQ96CN4 794 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 CEP95Q96GE4 821 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 SGSM3Q96HU1 749 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 DHRS1Q96LJ7 313 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 HTATIP2Q9BUP3 242 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 CWC22Q9HCG8 908 aaKnown RBP8.86□□□□□ -0.99
VMP1-213ENST00000591877 INCENPQ9NQS7 918 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 CLIP2Q9UDT6 1046 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 PPP1R9AQ9ULJ8 1098 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 HIF3AQ9Y2N7 669 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.86□□□□□ -0.995e-7■■■■■ 27.4
VMP1-213ENST00000591877 SMCHD1A6NHR9 2005 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 TRIOBPQ9H2D6 2365 aa8.86□□□□□ -0.99
VMP1-213ENST00000591877 CCDC163A0A0D9SF12 145 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 A0A0D9SFI3 127 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 VWA5AO00534 786 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 STRNO43815 780 aa8.85□□□□□ -0.99
VMP1-213ENST00000591877 SUSD5O60279 629 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms