RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 NVLO15381 856 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 MAGEB3O15480 346 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 KLRC4O43908 158 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 ATP9AO75110 1047 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 PEX11AO75192 247 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 ALDH2P05091 517 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 PTK7Q13308 1070 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 PLS1Q14651 629 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 ZC2HC1CQ53FD0 456 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 TDRD12Q587J7 1177 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 RETREG2Q8NC44 543 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 CALML4Q96GE6 196 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 ELAC2Q9BQ52 826 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 DDX23Q9BUQ8 820 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 DRC3Q9H069 523 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 MLXIPQ9HAP2 919 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 KBTBD4Q9NVX7 518 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 MKS1Q9NXB0 559 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 RASAL2Q9UJF2 1139 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 CARD8Q9Y2G2 431 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 MYH3P11055 1940 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 SPTLC1O15269 473 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 MOCS3O95396 460 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 FGRP09769 529 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 OR52Z1P0C646 297 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 ENDOUP21128 410 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 SERPINB3P29508 390 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 CYP4A11Q02928 519 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 ERMARDQ5T6L9 678 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 DYMQ7RTS9 669 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 ZC3H18Q86VM9 953 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 SLC44A5Q8NCS7 719 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 CENPKQ9BS16 269 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 FAM129AQ9BZQ8 928 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 TRIM9Q9C026 710 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 CCSER1Q9C0I3 900 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■■■■□ 25.1
SMARCA4-217ENST00000591595 TSC22D4Q9Y3Q8 395 aa13.14□□□□□ -0.31
SMARCA4-217ENST00000591595 TXKP42681 527 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 ITPK1Q13572 414 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 BCL2A1Q16548 175 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 ZNF317Q96PQ6 595 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 KIAA1522Q9P206 1035 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 MYH13Q9UKX3 1938 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 ESYT3A0FGR9 886 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 HSPA8P11142 646 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 PAFAH1B1P43034 410 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 CCT8P50990 548 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 KCNQ4P56696 695 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 MEA1Q16626 185 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 LRIG3Q6UXM1 1119 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 RRAGAQ7L523 313 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 ZNF333Q96JL9 665 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 NUDCD1Q96RS6 583 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 SLC39A3Q9BRY0 314 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 NMRK1Q9NWW6 199 aa13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 NOVA2Q9UNW9 492 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-217ENST00000591595 GALK1P51570 392 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 RPS8P62241 208 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 BNIP1Q12981 228 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 LIN52Q52LA3 116 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 CNNM4Q6P4Q7 775 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 SPATA24Q86W54 205 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 DGKHQ86XP1 1220 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 TUBGCP5Q96RT8 1024 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 IRF2BPLQ9H1B7 796 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 SH3GLB2Q9NR46 395 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 SMARCAL1Q9NZC9 954 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 DKK3Q9UBP4 350 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 TRIM33Q9UPN9 1127 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 H0Y3Z8 333 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 KDM1AO60341 852 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 ASMTLO95671 621 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 NONOQ15233 471 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 GALNTL6Q49A17 601 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 ASRGL1Q7L266 308 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 ZNF572Q7Z3I7 529 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 ZNF713Q8N859 430 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 OR2W6PQ8NHA6 318 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 PIGOQ8TEQ8 1089 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 CASP10Q92851 521 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 HNRNPABQ99729 332 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 CCT7Q99832 543 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 MAK16Q9BXY0 300 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 PLCB1Q9NQ66 1216 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 IL17RBQ9NRM6 502 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 ATAD3AQ9NVI7 634 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 CAPN6Q9Y6Q1 641 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 BAZ2AQ9UIF9 1905 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 SMCO2A6NFE2 343 aa13.12□□□□□ -0.31
SMARCA4-217ENST00000591595 SART1O43290 800 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms