RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 RAB30Q15771 203 aa17.72■□□□□ 0.43
PRKCSH-213ENST00000591510 ZNF598Q86UK7 904 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-213ENST00000591510 GPBP1Q86WP2 473 aa17.72■□□□□ 0.43
PRKCSH-213ENST00000591510 ZNF689Q96CS4 500 aaPredicted RBP17.72■□□□□ 0.43
PRKCSH-213ENST00000591510 REEP2Q9BRK0 252 aa17.72■□□□□ 0.43
PRKCSH-213ENST00000591510 FZD8Q9H461 694 aa17.72■□□□□ 0.43
PRKCSH-213ENST00000591510 CHST12Q9NRB3 414 aa17.72■□□□□ 0.43
PRKCSH-213ENST00000591510 RNF19AQ9NV58 838 aa17.72■□□□□ 0.43
PRKCSH-213ENST00000591510 ARHGAP28Q9P2N2 729 aa17.72■□□□□ 0.43
PRKCSH-213ENST00000591510 TMEM265A0A087WTH1 108 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 FAM237AA0A1B0GTK4 181 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 TTLL13PA6NNM8 815 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 LINC00271P0C7V0 271 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 NPTX2P47972 431 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 GIT2Q14161 759 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 PCBP1Q15365 356 aaKnown RBP eCLIP17.71■□□□□ 0.431e-14■■■■□ 24.5
PRKCSH-213ENST00000591510 FAM187BQ17R55 369 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 UBXN11Q5T124 520 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 RRAGBQ5VZM2 374 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 PPP4R3CPQ6ZMV5 832 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 SLC24A5Q71RS6 500 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 TAS1R3Q7RTX0 852 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 CATSPER4Q7RTX7 472 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 NPAS4Q8IUM7 802 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 KCNN1Q92952 543 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 SPATA32Q96LK8 384 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 DRC1Q96MC2 740 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 FIZ1Q96SL8 496 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 RAD9AQ99638 391 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 KIFC3Q9BVG8 833 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 NKX2-4Q9H2Z4 354 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 C1orf112Q9NSG2 853 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 CCDC39Q9UFE4 941 aa17.71■□□□□ 0.43
PRKCSH-213ENST00000591510 LRRIQ4A6NIV6 560 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 B4GALT5O43286 388 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 SSBP05455 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 TXLNAP40222 546 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 RAD51AP2Q09MP3 1159 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 PPP2R5AQ15172 486 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 FAM117BQ6P1L5 589 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 CCDC73Q6ZRK6 1079 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 SPRED2Q7Z698 418 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 TIFAQ96CG3 184 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 DNAJC19Q96DA6 116 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 NTPCRQ9BSD7 190 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 PANK2Q9BZ23 570 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 SCAND2PQ9GZW5 306 aaPredicted RBP17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 ODF2LQ9ULJ1 636 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 HPSEQ9Y251 543 aa17.7■□□□□ 0.42
PRKCSH-213ENST00000591510 A0A0U1RQF3 1178 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 DENND3A2RUS2 1198 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 MYMKA6NI61 221 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 INO80B-WBP1J3KQ70 363 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 TLL1O43897 1013 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 DGKIO75912 1065 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 CA3P07451 260 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 PLS3P13797 630 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 TAP1Q03518 808 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 ADALQ6DHV7 355 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 ECHDC2Q86YB7 292 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 PDILTQ8N807 584 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 RASSF8Q8NHQ8 419 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 SPIRE2Q8WWL2 714 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 C2orf40Q9H1Z8 148 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 ELAC1Q9H777 363 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 C17orf75Q9HAS0 396 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 GDPD2Q9HCC8 539 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 KBTBD4Q9NVX7 518 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 MSRAQ9UJ68 235 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 PIN4Q9Y237 131 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 RBM19Q9Y4C8 960 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 KIAA1671Q9BY89 1806 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 CNTNAP2Q9UHC6 1331 aa17.69■□□□□ 0.42
PRKCSH-213ENST00000591510 LINC01553A4QN01 128 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 SFI1A8K8P3 1242 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 ZNF623O75123 536 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 UPP2O95045 317 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 ARF4P18085 180 aaPredicted RBP17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 NCLP19338 710 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 CMA1P23946 247 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 STAT6P42226 847 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 PEX3P56589 373 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 DHX8Q14562 1220 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 Q7L0L9 218 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 TMEM161BQ8NDZ6 487 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 IFT74Q96LB3 600 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 PRIMPOLQ96LW4 560 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 TMEM161AQ9NX61 479 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 INSL6Q9Y581 213 aa17.68■□□□□ 0.42
PRKCSH-213ENST00000591510 NLRC5Q86WI3 1866 aa17.67■□□□□ 0.42
PRKCSH-213ENST00000591510 A0A1W2PQ27 194 aa17.67■□□□□ 0.42
PRKCSH-213ENST00000591510 A0A1W2PQ64 194 aa17.67■□□□□ 0.42
PRKCSH-213ENST00000591510 A0A1W2PQD8 194 aa17.67■□□□□ 0.42
PRKCSH-213ENST00000591510 FRMD3A2A2Y4 597 aa17.67■□□□□ 0.42
PRKCSH-213ENST00000591510 AXLP30530 894 aa17.67■□□□□ 0.42
PRKCSH-213ENST00000591510 GATMP50440 423 aa17.67■□□□□ 0.42
PRKCSH-213ENST00000591510 EFNA5P52803 228 aa17.67■□□□□ 0.42
PRKCSH-213ENST00000591510 NCKAP1LP55160 1127 aa17.67■□□□□ 0.42
PRKCSH-213ENST00000591510 DMP1Q13316 513 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms