RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ZRSR1Q15695 479 aaKnown RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 HIF1AQ16665 826 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 UGCGQ16739 394 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 KIAA0753Q2KHM9 967 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 TRIM60Q495X7 471 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 ZNF697Q5TEC3 545 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 C7orf61Q8IZ16 206 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 RASSF8Q8NHQ8 419 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 SEPT1Q8WYJ6 367 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 RNF166Q96A37 237 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 SUSD3Q96L08 255 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 USP28Q96RU2 1077 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 LXNQ9BS40 222 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 TSEN34Q9BSV6 310 aaKnown RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 RAB34Q9BZG1 259 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 TTC12Q9H892 705 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 PRDM5Q9NQX1 630 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 ZNF302Q9NR11 478 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 GABBR1Q9UBS5 961 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 PRKAG2Q9UGJ0 569 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 DMGDHQ9UI17 866 aaKnown RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 CLIC4Q9Y696 253 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 KAT6AQ92794 2004 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 PDE4DIPQ5VU43 2346 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 LTBP2Q14767 1821 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 GSTTP1A0A1W2PQM5 241 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 PP2D1A8MPX8 630 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 LAD1O00515 517 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 CABYRO75952 493 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 SMIM10L2AP0DMW4 78 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 SMIM10L2BP0DMW5 78 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 COL6A1P12109 1028 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 HOXD8P13378 290 aaPredicted RBP7.16□□□□□ -1.26
VPS4B-205ENST00000591383 MARCKSP29966 332 aaPredicted RBP7.16□□□□□ -1.26
VPS4B-205ENST00000591383 TECP42680 631 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 IGBP1P78318 339 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 SPIRE1Q08AE8 756 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 PPFIA1Q13136 1202 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 PPP2R5CQ13362 524 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 LRRC26Q2I0M4 334 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.16□□□□□ -1.26
VPS4B-205ENST00000591383 HAUS3Q68CZ6 603 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 CCSAPQ6IQ19 270 aaPredicted RBP7.16□□□□□ -1.26
VPS4B-205ENST00000591383 SWSAP1Q6NVH7 229 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 POTEGQ6S5H5 508 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 DTHD1Q6ZMT9 781 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 ZNF598Q86UK7 904 aaKnown RBP7.16□□□□□ -1.26
VPS4B-205ENST00000591383 C7orf31Q8N865 590 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 ERMNQ8TAM6 284 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 SNX29Q8TEQ0 813 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 KAT2BQ92831 832 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 ATP6V0A1Q93050 837 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 DYDC2Q96IM9 177 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 CHAMP1Q96JM3 812 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 IPO9Q96P70 1041 aaKnown RBP7.16□□□□□ -1.26
VPS4B-205ENST00000591383 MTMR9Q96QG7 549 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 SMARCAD1Q9H4L7 1026 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 ZDHHC3Q9NYG2 299 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 ERAP1Q9NZ08 941 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 PCDHA12Q9UN75 941 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 ZDHHC9Q9Y397 364 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 PCDHA10Q9Y5I2 948 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 ATP6V1DQ9Y5K8 247 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 TCHHQ07283 1943 aa7.16□□□□□ -1.26
VPS4B-205ENST00000591383 TRIP12Q14669 1992 aaPredicted RBP7.16□□□□□ -1.26
VPS4B-205ENST00000591383 TMEM150BA6NC51 233 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 J3QL48 77 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 TLR3O15455 904 aaKnown RBP7.15□□□□□ -1.26
VPS4B-205ENST00000591383 PPFIA4O75335 1185 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 TNFRSF21O75509 655 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 YEATS4O95619 227 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 CAPN2P17655 700 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 DDIT3P35638 169 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 CCT6AP40227 531 aaKnown RBP7.15□□□□□ -1.26
VPS4B-205ENST00000591383 PRPHP41219 470 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 ME1P48163 572 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 RNF144AP50876 292 aaPredicted RBP7.15□□□□□ -1.26
VPS4B-205ENST00000591383 STAT5BP51692 787 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 NKX3-2P78367 333 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 KRT85P78386 507 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 ITGA7Q13683 1181 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 CTTNQ14247 550 aaKnown RBP7.15□□□□□ -1.26
VPS4B-205ENST00000591383 GRIK4Q16099 956 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 IER5Q5VY09 327 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 PLA2G4FQ68DD2 849 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 XKR5Q6UX68 686 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 ABHD15Q6UXT9 468 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 TPH2Q8IWU9 490 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 RDM1Q8NG50 284 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 NEK9Q8TD19 979 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 TRAPPC12Q8WVT3 735 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 CCDC74AQ96AQ1 378 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 CDK5RAP3Q96JB5 506 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 FAM167AQ96KS9 214 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 PCYT2Q99447 389 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 EIF2AK1Q9BQI3 630 aaKnown RBP7.15□□□□□ -1.26
VPS4B-205ENST00000591383 C16orf70Q9BSU1 422 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 HTATIP2Q9BUP3 242 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 OSBPL7Q9BZF2 842 aa7.15□□□□□ -1.26
VPS4B-205ENST00000591383 RGL1Q9NZL6 768 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms