RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SLC24A5Q71RS6 500 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 CDR2LQ86X02 465 aaPredicted RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 ECHDC2Q86YB7 292 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 LINC00301Q8NCQ3 95 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 MCPH1Q8NEM0 835 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 SYMPKQ92797 1274 aaKnown RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 LPPQ93052 612 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 ZNF689Q96CS4 500 aaPredicted RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 CPB2Q96IY4 423 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 PIN4Q9Y237 131 aaKnown RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 SRPRBQ9Y5M8 271 aaKnown RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 MRPL42Q9Y6G3 142 aaKnown RBP12.78□□□□□ -0.36
VMP1-211ENST00000591315 ADGRA3Q8IWK6 1321 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 NLRC5Q86WI3 1866 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 TCHHQ07283 1943 aa12.78□□□□□ -0.36
VMP1-211ENST00000591315 KIAA1671Q9BY89 1806 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 A0A087X0B3 334 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 INO80B-WBP1J3KQ70 363 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 TSPAN1O60635 241 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 LPXNO60711 386 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 HIP1RO75146 1068 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 BRD1O95696 1058 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 ZSCAN20P17040 1043 aaPredicted RBP12.77□□□□□ -0.37
VMP1-211ENST00000591315 SFPQP23246 707 aaKnown RBP eCLIP12.77□□□□□ -0.37
VMP1-211ENST00000591315 LONP1P36776 959 aaKnown RBP12.77□□□□□ -0.37
VMP1-211ENST00000591315 PHKA2P46019 1235 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 SLC12A3P55017 1021 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 ERVK-21P61565 698 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 DNM1Q05193 864 aaKnown RBP12.77□□□□□ -0.37
VMP1-211ENST00000591315 MAPK7Q13164 816 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 MCM6Q14566 821 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 STK38Q15208 465 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 ARSHQ5FYA8 562 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 CLLU1OSQ5K130 101 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 ODR4Q5SWX8 454 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 UBXN11Q5T124 520 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 TWF2Q6IBS0 349 aaKnown RBP12.77□□□□□ -0.37
VMP1-211ENST00000591315 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 ZNF598Q86UK7 904 aaKnown RBP12.77□□□□□ -0.37
VMP1-211ENST00000591315 GDPD5Q8WTR4 605 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 CDK5RAP3Q96JB5 506 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 AK8Q96MA6 479 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 INO80BQ9C086 356 aaPredicted RBP12.77□□□□□ -0.37
VMP1-211ENST00000591315 C1orf112Q9NSG2 853 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 AGPAT5Q9NUQ2 364 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 LRFN2Q9ULH4 789 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 PCDHB7Q9Y5E2 793 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 STK24Q9Y6E0 443 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 MYH11P35749 1972 aa12.77□□□□□ -0.37
VMP1-211ENST00000591315 TBKBP1A7MCY6 615 aa12.76□□□□□ -0.37
VMP1-211ENST00000591315 FOSL2P15408 326 aa12.76□□□□□ -0.37
VMP1-211ENST00000591315 LIG1P18858 919 aa12.76□□□□□ -0.37
VMP1-211ENST00000591315 IGFBP4P22692 258 aa12.76□□□□□ -0.37
VMP1-211ENST00000591315 TFDP1Q14186 410 aa12.76□□□□□ -0.37
VMP1-211ENST00000591315 BTG3Q14201 252 aaPredicted RBP12.76□□□□□ -0.37
VMP1-211ENST00000591315 IFNLR1Q8IU57 520 aaPredicted RBP12.76□□□□□ -0.37
VMP1-211ENST00000591315 SYT2Q8N9I0 419 aaPredicted RBP12.76□□□□□ -0.37
VMP1-211ENST00000591315 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
VMP1-211ENST00000591315 TGS1Q96RS0 853 aaKnown RBP12.76□□□□□ -0.37
VMP1-211ENST00000591315 EIF2AQ9BY44 585 aaKnown RBP12.76□□□□□ -0.37
VMP1-211ENST00000591315 CCSER1Q9C0I3 900 aa12.76□□□□□ -0.37
VMP1-211ENST00000591315 STXBP5LQ9Y2K9 1186 aa12.76□□□□□ -0.37
VMP1-211ENST00000591315 COL4A4P53420 1690 aaPredicted RBP12.76□□□□□ -0.37
VMP1-211ENST00000591315 A0A0U1RQF3 1178 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 SPTLC2O15270 562 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 STAG3L1P0CL83 205 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 ARF4P18085 180 aaPredicted RBP12.75□□□□□ -0.37
VMP1-211ENST00000591315 AFF1P51825 1210 aaKnown RBP12.75□□□□□ -0.37
VMP1-211ENST00000591315 PEX3P56589 373 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 CCDC85BQ15834 202 aaPredicted RBP12.75□□□□□ -0.37
VMP1-211ENST00000591315 EPC2Q52LR7 807 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 NAALADL2Q58DX5 795 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 CDCA2Q69YH5 1023 aaPredicted RBP12.75□□□□□ -0.37
VMP1-211ENST00000591315 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 TMEM192Q8IY95 271 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 FIBCD1Q8N539 461 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 RASSF8Q8NHQ8 419 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 HELQQ8TDG4 1101 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 PPM1EQ8WY54 764 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 RAD54LQ92698 747 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 CALML4Q96GE6 196 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 ZNF396Q96N95 335 aaPredicted RBP12.75□□□□□ -0.37
VMP1-211ENST00000591315 CASD1Q96PB1 797 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 FAM105AQ9NUU6 356 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 TMEM161AQ9NX61 479 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 PCDHB2Q9Y5E7 798 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 UNC80Q8N2C7 3258 aa12.75□□□□□ -0.37
VMP1-211ENST00000591315 CTNNB1P35222 781 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 NPTX2P47972 431 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 POU5F1BQ06416 359 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 BECN1Q14457 450 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 AXDND1Q5T1B0 1012 aaPredicted RBP12.74□□□□□ -0.37
VMP1-211ENST00000591315 EEF1DP3Q658K8 133 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 TAS1R3Q7RTX0 852 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 GPBP1Q86WP2 473 aa12.74□□□□□ -0.37
VMP1-211ENST00000591315 CMTR2Q8IYT2 770 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms