RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 RASSF8Q8NHQ8 419 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 RGS18Q9NS28 235 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 ARHGAP28Q9P2N2 729 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 USP20Q9Y2K6 914 aa23.3■■□□□ 1.32
CIRBP-229ENST00000590704 GADD45BO75293 160 aaPredicted RBP23.29■■□□□ 1.32
CIRBP-229ENST00000590704 PEX3P56589 373 aa23.29■■□□□ 1.32
CIRBP-229ENST00000590704 SV2BQ7L1I2 683 aa23.29■■□□□ 1.32
CIRBP-229ENST00000590704 TMEM87AQ8NBN3 555 aa23.29■■□□□ 1.32
CIRBP-229ENST00000590704 KCNN1Q92952 543 aa23.29■■□□□ 1.32
CIRBP-229ENST00000590704 TOP1MTQ969P6 601 aa23.29■■□□□ 1.32
CIRBP-229ENST00000590704 ADAM2Q99965 735 aa23.29■■□□□ 1.32
CIRBP-229ENST00000590704 SERTAD1Q9UHV2 236 aa23.29■■□□□ 1.32
CIRBP-229ENST00000590704 ODF2LQ9ULJ1 636 aa23.29■■□□□ 1.32
CIRBP-229ENST00000590704 SLC4A7Q9Y6M7 1214 aa23.29■■□□□ 1.32
CIRBP-229ENST00000590704 FRMD3A2A2Y4 597 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 LRRIQ4A6NIV6 560 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 B4GALT5O43286 388 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 PLS3P13797 630 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 CASP1P29466 404 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 SNW1Q13573 536 aaKnown RBP23.28■■□□□ 1.32
CIRBP-229ENST00000590704 FAM187BQ17R55 369 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 UBXN11Q5T124 520 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 CNNM4Q6P4Q7 775 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 DYMQ7RTS9 669 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 IQUBQ8NA54 791 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 PHOSPHO2Q8TCD6 241 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 FTHL17Q9BXU8 183 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 C17orf75Q9HAS0 396 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 AGPAT5Q9NUQ2 364 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 FAM13BQ9NYF5 915 aa23.28■■□□□ 1.32
CIRBP-229ENST00000590704 CHD9Q3L8U1 2897 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 GBF1Q92538 1859 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 ZBBXA8MT70 800 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 TSPAN1O60635 241 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 PBX2P40425 430 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 PHKA2P46019 1235 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 TFDP1Q14186 410 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 PPP4R3CPQ6ZMV5 832 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 FSIP1Q8NA03 581 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 TMEM161BQ8NDZ6 487 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 SPIRE2Q8WWL2 714 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 DRC1Q96MC2 740 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 SCLT1Q96NL6 688 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 INO80BQ9C086 356 aaPredicted RBP23.27■■□□□ 1.32
CIRBP-229ENST00000590704 CUEDC2Q9H467 287 aa23.27■■□□□ 1.32
CIRBP-229ENST00000590704 CHD7Q9P2D1 2997 aa23.26■■□□□ 1.31
CIRBP-229ENST00000590704 EFCAB14O75071 495 aa23.26■■□□□ 1.31
CIRBP-229ENST00000590704 ARHGEF15O94989 841 aa23.26■■□□□ 1.31
CIRBP-229ENST00000590704 ATF7P17544 494 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-229ENST00000590704 RABGGTBP53611 331 aa23.26■■□□□ 1.31
CIRBP-229ENST00000590704 GRAMD1CQ8IYS0 662 aa23.26■■□□□ 1.31
CIRBP-229ENST00000590704 FMR1NBQ8N0W7 255 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-229ENST00000590704 TRAIPQ9BWF2 469 aa23.26■■□□□ 1.31
CIRBP-229ENST00000590704 TRIM9Q9C026 710 aa23.26■■□□□ 1.31
CIRBP-229ENST00000590704 TNMDQ9H2S6 317 aa23.26■■□□□ 1.31
CIRBP-229ENST00000590704 RC3H2Q9HBD1 1191 aaKnown RBP23.26■■□□□ 1.31
CIRBP-229ENST00000590704 RNF19AQ9NV58 838 aa23.26■■□□□ 1.31
CIRBP-229ENST00000590704 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-229ENST00000590704 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-229ENST00000590704 INO80B-WBP1J3KQ70 363 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 SLFN14P0C7P3 912 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 MYOGP15173 224 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 ATP2A2P16615 1042 aaKnown RBP23.25■■□□□ 1.31
CIRBP-229ENST00000590704 ARF4P18085 180 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-229ENST00000590704 NCKAP1LP55160 1127 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 NT5DC1Q5TFE4 455 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 ZNF598Q86UK7 904 aaKnown RBP23.25■■□□□ 1.31
CIRBP-229ENST00000590704 HERC6Q8IVU3 1022 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 SLC9A7Q96T83 725 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 C7orf25Q9BPX7 421 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 STRA6Q9BX79 667 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 CHST12Q9NRB3 414 aa23.25■■□□□ 1.31
CIRBP-229ENST00000590704 YBX2Q9Y2T7 364 aaKnown RBP23.25■■□□□ 1.31
CIRBP-229ENST00000590704 SLC16A4O15374 487 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 GJB5O95377 273 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 SFPQP23246 707 aaKnown RBP eCLIP23.24■■□□□ 1.31
CIRBP-229ENST00000590704 HTRA4P83105 476 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-229ENST00000590704 TPRNQ4KMQ1 711 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 FAM43BQ6ZT52 329 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-229ENST00000590704 CATSPER4Q7RTX7 472 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 MRPS27Q92552 414 aaKnown RBP23.24■■□□□ 1.31
CIRBP-229ENST00000590704 PAGE5Q96GU1 130 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 LRCH3Q96II8 777 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 CPB2Q96IY4 423 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 IFT74Q96LB3 600 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 FGFBP2Q9BYJ0 223 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 PBX4Q9BYU1 374 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 TMEM134Q9H6X4 195 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 A0A1B0GUA9 196 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 SMAD3P84022 425 aaKnown RBP23.24■■□□□ 1.31
CIRBP-229ENST00000590704 EHHADHQ08426 723 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 PPP2R5AQ15172 486 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 ODR4Q5SWX8 454 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 SLC24A5Q71RS6 500 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 MYOCDQ8IZQ8 938 aa23.24■■□□□ 1.31
CIRBP-229ENST00000590704 ZNF689Q96CS4 500 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-229ENST00000590704 A0A0U1RQF3 1178 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 CCDC169A6NNP5 214 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 ZNF202O95125 648 aa23.23■■□□□ 1.31
CIRBP-229ENST00000590704 MAPTP10636 758 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms