RNA–Protein interactions for RNA: ENST00000590602.5

TMC6-216, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMC6, Length 5,268 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-216ENST00000590602 CAPN11Q9UMQ6 739 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 TFR2Q9UP52 801 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 GPC4O75487 556 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 RAD17O75943 681 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 TDP2O95551 362 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 FCER1AP12319 257 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 PLS3P13797 630 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 KCNH2Q12809 1159 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 DALRD3Q5D0E6 543 aaKnown RBP16.75■□□□□ 0.27
TMC6-216ENST00000590602 FAM83BQ5T0W9 1011 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 HNRNPLLQ8WVV9 542 aaKnown RBP16.75■□□□□ 0.27
TMC6-216ENST00000590602 PPWD1Q96BP3 646 aaKnown RBP16.75■□□□□ 0.27
TMC6-216ENST00000590602 LRRC37BQ96QE4 947 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 NUDCD1Q96RS6 583 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 SEPT10Q9P0V9 454 aa16.75■□□□□ 0.27
TMC6-216ENST00000590602 KCNQ2O43526 872 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 KPNA2P52292 529 aaKnown RBP16.74■□□□□ 0.27
TMC6-216ENST00000590602 MIGA2Q7L4E1 593 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 FAM20AQ96MK3 541 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 APOL6Q9BWW8 343 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 DCTN4Q9UJW0 460 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 BRAFP15056 766 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 DYNLT1P63172 113 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 SEPT12Q8IYM1 358 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 CDR2Q01850 454 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 RHOT2Q8IXI1 618 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 GANCQ8TET4 914 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 SLC10A4Q96EP9 437 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 TGS1Q96RS0 853 aaKnown RBP16.74■□□□□ 0.27
TMC6-216ENST00000590602 TUBB6Q9BUF5 446 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 SLC40A1Q9NP59 571 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 DNAJC12Q9UKB3 198 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 SPATA31D1Q6ZQQ2 1576 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 ADRA2BP18089 450 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 DRP2Q13474 957 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 SPARCL1Q14515 664 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 LCA5Q86VQ0 697 aa16.74■□□□□ 0.27
TMC6-216ENST00000590602 INO80B-WBP1J3KQ70 363 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 CAMTA2O94983 1202 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 PDE1BQ01064 536 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 SF3B3Q15393 1217 aaKnown RBP16.73■□□□□ 0.27
TMC6-216ENST00000590602 RCSD1Q6JBY9 416 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 ARMCX2Q7L311 632 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 ZIM3Q96PE6 472 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 INO80BQ9C086 356 aaPredicted RBP16.73■□□□□ 0.27
TMC6-216ENST00000590602 CCSER1Q9C0I3 900 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 H7C0C1 242 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 PODXLO00592 558 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 ATP5OP48047 213 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 ERFP50548 548 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 SURF1Q15526 300 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 ATP6V1E2Q96A05 226 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 ZFP69BQ9UJL9 534 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 G3BP2Q9UN86 482 aaKnown RBP16.73■□□□□ 0.27
TMC6-216ENST00000590602 RASSF10A6NK89 507 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 HOXD10P28358 340 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 C2orf69Q8N8R5 385 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 PRELPP51888 382 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 KNOP1Q1ED39 458 aaKnown RBP16.73■□□□□ 0.27
TMC6-216ENST00000590602 MMEL1Q495T6 779 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 ANKRD40Q6AI12 368 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 FAM149B1Q96BN6 582 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 MRPL47Q9HD33 250 aaKnown RBP16.73■□□□□ 0.27
TMC6-216ENST00000590602 AGPAT5Q9NUQ2 364 aa16.73■□□□□ 0.27
TMC6-216ENST00000590602 DIS3Q9Y2L1 958 aaKnown RBP16.73■□□□□ 0.27
TMC6-216ENST00000590602 LRRIQ3A6PVS8 624 aaPredicted RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 LMNAP02545 664 aaKnown RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 PDZD8Q8NEN9 1154 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.72■□□□□ 0.274e-9■■□□□ 14.1
TMC6-216ENST00000590602 ITIH6Q6UXX5 1313 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 TOM1L1O75674 476 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 IRX1P78414 480 aaPredicted RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 BASP1P80723 227 aaKnown RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 BBS9Q3SYG4 887 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 RFX8Q6ZV50 586 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 EPM2AIP1Q7L775 607 aaPredicted RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 SEC16BQ96JE7 1060 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 RBM12Q9NTZ6 932 aaKnown RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 GOLGA8IPA6NC78 632 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 GOLGA8JA6NMD2 632 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 PHEXP78562 749 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 CYFIP2Q96F07 1278 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 RNPC3Q96LT9 517 aaKnown RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 PRMT1Q99873 361 aaKnown RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 GRID2IPA4D2P6 1211 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 GYPCP04921 128 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 MMP10P09238 476 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 EIF2AK2P19525 551 aaKnown RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 ECE1P42892 770 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 QRICH1Q2TAL8 776 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 TTC17Q96AE7 1141 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 LRRC4Q9HBW1 653 aa16.72■□□□□ 0.27
TMC6-216ENST00000590602 PPARGC1AQ9UBK2 798 aaKnown RBP16.72■□□□□ 0.27
TMC6-216ENST00000590602 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
TMC6-216ENST00000590602 POTEIP0CG38 1075 aa16.71■□□□□ 0.27
TMC6-216ENST00000590602 GNAT1P11488 350 aa16.71■□□□□ 0.27
TMC6-216ENST00000590602 NAALADL2Q58DX5 795 aa16.71■□□□□ 0.27
TMC6-216ENST00000590602 POTEGQ6S5H5 508 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms