RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 LGR5O75473 907 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 SNAI1O95863 264 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 SPATA31C1P0DKV0 1188 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 MAPTP10636 758 aaKnown RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 TAL1P17542 331 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 GUCY2CP25092 1073 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 TMOD1P28289 359 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 ERCC5P28715 1186 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 YWHABP31946 246 aaKnown RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 LBX1P52954 281 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 RTP1P59025 263 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 SNRPFP62306 86 aaKnown RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 NKX3-2P78367 333 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 GRB10Q13322 594 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 CCDC144BQ3MJ40 725 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 ZNF484Q5JVG2 852 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 SPECC1Q5M775 1068 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 SWSAP1Q6NVH7 229 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 TAPT1Q6NXT6 567 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 FOXR2Q6PJQ5 311 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 UNC13DQ70J99 1090 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 FBXO16Q8IX29 292 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 OR6J1Q8NGC5 347 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 SPATA20Q8TB22 786 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 GOLGA5Q8TBA6 731 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 ADAMTS19Q8TE59 1207 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 FGD4Q96M96 766 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 GPR20Q99678 358 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 MMTAG2Q9BU76 263 aaKnown RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 NIFKQ9BYG3 293 aaKnown RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 PANK2Q9BZ23 570 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 GOLPH3LQ9H4A5 285 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 CGNQ9P2M7 1197 aaKnown RBP8.11□□□□□ -1.11
SMAD4-210ENST00000590061 TUBE1Q9UJT0 475 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 MGAMO43451 1857 aa8.11□□□□□ -1.11
SMAD4-210ENST00000590061 BECN2A8MW95 431 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 GOLGA6L19H0YKK7 550 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 PSMA7O14818 248 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ATP9AO75110 1047 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 IGHA2P01877 340 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 RPN1P04843 607 aaKnown RBP8.1□□□□□ -1.11
SMAD4-210ENST00000590061 SSBP05455 408 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMAD4-210ENST00000590061 HOXD8P13378 290 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-210ENST00000590061 CYP11B2P19099 503 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 TCF7P36402 384 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-210ENST00000590061 GSK3AP49840 483 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 NLRP12P59046 1061 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ASIC1P78348 528 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 GRIN1Q05586 938 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 DPYDQ12882 1025 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 MXD4Q14582 209 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-210ENST00000590061 CAMK4Q16566 473 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 LY6KQ17RY6 165 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 UVSSAQ2YD98 709 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 C4orf17Q53FE4 359 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 COBLL1Q53SF7 1204 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 L1TD1Q5T7N2 865 aaKnown RBP8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ZNF658Q5TYW1 1059 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-210ENST00000590061 EEPD1Q7L9B9 569 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 RNF180Q86T96 592 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ZNF295-AS1Q8N0V1 137 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ARRDC4Q8NCT1 418 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ANKRD20A12PQ8NF67 263 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 NPLOC4Q8TAT6 608 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ATP8B4Q8TF62 1192 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 DHTKD1Q96HY7 919 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ABHD8Q96I13 439 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 DYDC2Q96IM9 177 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 CHAMP1Q96JM3 812 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 IFT74Q96LB3 600 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ZIC5Q96T25 663 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 BPIFA3Q9BQP9 254 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 TRIM9Q9C026 710 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 BHMT2Q9H2M3 363 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 PARVGQ9HBI0 331 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 TIMMDC1Q9NPL8 285 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 TMEM63CQ9P1W3 806 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 GABBR1Q9UBS5 961 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 KAT6AQ92794 2004 aa8.1□□□□□ -1.11
SMAD4-210ENST00000590061 ASTN1O14525 1302 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 UBE4BO95155 1302 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 IGSF9BQ9UPX0 1349 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 SYCE3A1L190 88 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 POM121CA8CG34 1229 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 DDX39AO00148 427 aaKnown RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 EML1O00423 815 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 MED24O75448 989 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 RHOBTB3O94955 611 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 FAM13AO94988 1023 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 ARHGEF15O94989 841 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 CCNE2O96020 404 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 TPM3P06753 285 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 ZNF865P0CJ78 1059 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 HSPA8P11142 646 aaKnown RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 CDC25AP30304 524 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 GRK4P32298 578 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 AFMP43652 599 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 SARSP49591 514 aaKnown RBP8.09□□□□□ -1.11
SMAD4-210ENST00000590061 EFNA5P52803 228 aa8.09□□□□□ -1.11
SMAD4-210ENST00000590061 SLC12A3P55017 1021 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms