RNA–Protein interactions for RNA: ENST00000589901.2

MBD3-206, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-206ENST00000589901 BMP2KQ9NSY1 1161 aaPredicted RBP18.24■□□□□ 0.51
MBD3-206ENST00000589901 INPP5FQ9Y2H2 1132 aa18.24■□□□□ 0.51
MBD3-206ENST00000589901 COL4A3BPQ9Y5P4 624 aa18.24■□□□□ 0.51
MBD3-206ENST00000589901 TECTAO75443 2155 aa18.24■□□□□ 0.51
MBD3-206ENST00000589901 STK36Q9NRP7 1315 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 PFKFB2O60825 505 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 CLASP2O75122 1294 aaKnown RBP18.23■□□□□ 0.51
MBD3-206ENST00000589901 CTDNEP1O95476 244 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 CXCL14O95715 111 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 P4HBP07237 508 aaKnown RBP18.23■□□□□ 0.51
MBD3-206ENST00000589901 GCFC2P16383 781 aaKnown RBP18.23■□□□□ 0.51
MBD3-206ENST00000589901 HOXB8P17481 243 aaPredicted RBP18.23■□□□□ 0.51
MBD3-206ENST00000589901 NHLH1Q02575 133 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 GLB1LQ6UWU2 654 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 VPS52Q8N1B4 723 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 BCL7CQ8WUZ0 217 aaPredicted RBP18.23■□□□□ 0.51
MBD3-206ENST00000589901 PRPF31Q8WWY3 499 aaKnown RBP18.23■□□□□ 0.51
MBD3-206ENST00000589901 AUTS2Q8WXX7 1259 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 SLC7A3Q8WY07 619 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 CASP10Q92851 521 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 TMEM143Q96AN5 459 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 PBXIP1Q96AQ6 731 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 TMEM169Q96HH4 297 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 KCNH6Q9H252 994 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 NRDE2Q9H7Z3 1164 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 TBC1D13Q9NVG8 400 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 RGL1Q9NZL6 768 aa18.23■□□□□ 0.51
MBD3-206ENST00000589901 FAM205CA6NFA0 338 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 ZBTB39O15060 712 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 ZNF623O75123 536 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 OFD1O75665 1012 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 SRGAP2CP0DJJ0 459 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 SKIP12755 728 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 XBP1P17861 261 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 POLGP54098 1239 aaPredicted RBP18.22■□□□□ 0.51
MBD3-206ENST00000589901 NOMO2Q5JPE7 1267 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 BMP8AQ7Z5Y6 402 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 LXNQ9BS40 222 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 GBP3Q9H0R5 595 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 ZBP1Q9H171 429 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 DHX33Q9H6R0 707 aaKnown RBP18.22■□□□□ 0.51
MBD3-206ENST00000589901 MINDY3Q9H8M7 445 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 AGPAT5Q9NUQ2 364 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 PPP4R2Q9NY27 417 aa18.22■□□□□ 0.51
MBD3-206ENST00000589901 ORC3Q9UBD5 711 aaPredicted RBP18.22■□□□□ 0.51
MBD3-206ENST00000589901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.21■□□□□ 0.51
MBD3-206ENST00000589901 TBX3O15119 743 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 MARCH6O60337 910 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 B4GALT3O60512 393 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 DKC1O60832 514 aaKnown RBP eCLIP18.21■□□□□ 0.51
MBD3-206ENST00000589901 GALTP07902 379 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 YWHABP31946 246 aaKnown RBP18.21■□□□□ 0.51
MBD3-206ENST00000589901 RAB27AP51159 221 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 AFF1P51825 1210 aaKnown RBP18.21■□□□□ 0.51
MBD3-206ENST00000589901 NR5A1Q13285 461 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 EPHA7Q15375 998 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 NCAPH2Q6IBW4 605 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 C4orf19Q8IY42 314 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 PSPC1Q8WXF1 523 aaKnown RBP18.21■□□□□ 0.51
MBD3-206ENST00000589901 IGSF21Q96ID5 467 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 DYDC2Q96IM9 177 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 DNAJB4Q9UDY4 337 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 PCDHB2Q9Y5E7 798 aa18.21■□□□□ 0.51
MBD3-206ENST00000589901 WEE2P0C1S8 567 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 FDPSP14324 419 aaKnown RBP18.2■□□□□ 0.5
MBD3-206ENST00000589901 HOXA11P31270 313 aaPredicted RBP18.2■□□□□ 0.5
MBD3-206ENST00000589901 RFC5P40937 340 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 SLC11A1P49279 550 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 AK2P54819 239 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 CYP4A11Q02928 519 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 RNASELQ05823 741 aaKnown RBP18.2■□□□□ 0.5
MBD3-206ENST00000589901 SPIRE1Q08AE8 756 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 LAMTOR4Q0VGL1 99 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 CTTNQ14247 550 aaKnown RBP18.2■□□□□ 0.5
MBD3-206ENST00000589901 TPRNQ4KMQ1 711 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 IER5LQ5T953 404 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 KANK3Q6NY19 840 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 AGMOQ6ZNB7 445 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 DDX53Q86TM3 631 aaKnown RBP18.2■□□□□ 0.5
MBD3-206ENST00000589901 ZNF280BQ86YH2 543 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 RSPH1Q8WYR4 309 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 PGBD4Q96DM1 585 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 NAP1L4Q99733 375 aaKnown RBP18.2■□□□□ 0.5
MBD3-206ENST00000589901 VN1R3Q9BXE9 311 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 ADAM7Q9H2U9 754 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 POMKQ9H5K3 350 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 TSHZ2Q9NRE2 1034 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 ZNF318Q5VUA4 2279 aa18.2■□□□□ 0.5
MBD3-206ENST00000589901 CTSAP10619 480 aa18.19■□□□□ 0.5
MBD3-206ENST00000589901 ITIH3Q06033 890 aa18.19■□□□□ 0.5
MBD3-206ENST00000589901 SIGLEC14Q08ET2 396 aa18.19■□□□□ 0.5
MBD3-206ENST00000589901 BMS1Q14692 1282 aaKnown RBP18.19■□□□□ 0.5
MBD3-206ENST00000589901 EMC2Q15006 297 aa18.19■□□□□ 0.5
MBD3-206ENST00000589901 PTPN21Q16825 1174 aa18.19■□□□□ 0.5
MBD3-206ENST00000589901 XKR9Q5GH70 373 aa18.19■□□□□ 0.5
MBD3-206ENST00000589901 UBXN11Q5T124 520 aa18.19■□□□□ 0.5
MBD3-206ENST00000589901 CES5AQ6NT32 575 aa18.19■□□□□ 0.5
MBD3-206ENST00000589901 SRGAP1Q7Z6B7 1085 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms