RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 NPEPPSP55786 919 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 TNNC1P63316 161 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 ENPEPQ07075 957 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 MTFR1Q15390 333 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 KIAA0753Q2KHM9 967 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 KIAA1755Q5JYT7 1200 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 GPR153Q6NV75 609 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 MIGA2Q7L4E1 593 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 NOA1Q8NC60 698 aaKnown RBP11.55□□□□□ -0.56
ZNF540-208ENST00000589857 CYP2W1Q8TAV3 490 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 U2AF1L4Q8WU68 220 aaKnown RBP11.55□□□□□ -0.56
ZNF540-208ENST00000589857 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.55□□□□□ -0.56
ZNF540-208ENST00000589857 PNKPQ96T60 521 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 CRACR2AQ9BSW2 395 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 STK33Q9BYT3 514 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 ST6GALNAC4Q9H4F1 302 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 MLXIPQ9HAP2 919 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 AGO4Q9HCK5 861 aaKnown RBP11.55□□□□□ -0.56
ZNF540-208ENST00000589857 AGPAT3Q9NRZ7 376 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 ANKEF1Q9NU02 776 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 DMAC2Q9NW81 257 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 PSD3Q9NYI0 1048 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 HDAC6Q9UBN7 1215 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 PPP1R9AQ9ULJ8 1098 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 CAPN6Q9Y6Q1 641 aa11.55□□□□□ -0.56
ZNF540-208ENST00000589857 PHF20L1A8MW92 1017 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 RSPH10B2B2RC85 870 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 K7ENM7 598 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 EXOC3O60645 756 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 HIP1RO75146 1068 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 H2AFZP0C0S5 128 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 RSPH10BP0C881 870 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 ARP10275 920 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 ALAS1P13196 640 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 PLS3P13797 630 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 CCND2P30279 289 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 TNNT3P45378 269 aaPredicted RBP11.54□□□□□ -0.56
ZNF540-208ENST00000589857 SMTNP53814 917 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 PSMC5P62195 406 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 MYL7Q01449 175 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 CAP1Q01518 475 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 NNTQ13423 1086 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 MTMR1Q13613 665 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 CASP8Q14790 479 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 H2AFVQ71UI9 128 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 OTUD6AQ7L8S5 288 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 CREG2Q8IUH2 290 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 C4orf19Q8IY42 314 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 PXYLP1Q8TE99 480 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 CLEC4DQ8WXI8 215 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 EXOC4Q96A65 974 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 GPRASP2Q96D09 838 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 UIMC1Q96RL1 719 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 EPC1Q9H2F5 836 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 C17orf75Q9HAS0 396 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 PICK1Q9NRD5 415 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 KCNH7Q9NS40 1196 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 KCNH4Q9UQ05 1017 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 DIS3Q9Y2L1 958 aaKnown RBP11.54□□□□□ -0.56
ZNF540-208ENST00000589857 SAMM50Q9Y512 469 aa11.54□□□□□ -0.56
ZNF540-208ENST00000589857 MYH7BA7E2Y1 1941 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 HTTP42858 3142 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 C19orf81C9J6K1 198 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 PMM2O15305 246 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 TGFB1I1O43294 461 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 ADCY3O60266 1144 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 NMT1P30419 496 aaKnown RBP11.53□□□□□ -0.56
ZNF540-208ENST00000589857 HOXD13P35453 343 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 SOX5P35711 763 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 FMO5P49326 533 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
ZNF540-208ENST00000589857 EPHB4P54760 987 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 JAM2P57087 298 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 RPS6KA1Q15418 735 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 PPP2R5EQ16537 467 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 MEI1Q5TIA1 1274 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 ZNF746Q6NUN9 644 aaPredicted RBP11.53□□□□□ -0.56
ZNF540-208ENST00000589857 C8orf74Q6P047 294 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 ALKBH5Q6P6C2 394 aaKnown RBP11.53□□□□□ -0.56
ZNF540-208ENST00000589857 EMBQ6PCB8 327 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
ZNF540-208ENST00000589857 IRF2BP2Q7Z5L9 587 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 IFT20Q8IY31 132 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 EIF1ADQ8N9N8 165 aaKnown RBP11.53□□□□□ -0.56
ZNF540-208ENST00000589857 SPATA4Q8NEY3 305 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 SYTL5Q8TDW5 730 aaPredicted RBP11.53□□□□□ -0.56
ZNF540-208ENST00000589857 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 FAM81BQ96LP2 452 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 AGBL1Q96MI9 1066 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 SENP7Q9BQF6 1050 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 ADAMTS1Q9UHI8 967 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 SLC45A1Q9Y2W3 748 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 DUSP10Q9Y6W6 482 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 ZNF536O15090 1300 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 ZMYM2Q9UBW7 1377 aa11.53□□□□□ -0.56
ZNF540-208ENST00000589857 TULP1O00294 542 aaPredicted RBP11.52□□□□□ -0.57
ZNF540-208ENST00000589857 TNPO2O14787 897 aaKnown RBP11.52□□□□□ -0.57
ZNF540-208ENST00000589857 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
ZNF540-208ENST00000589857 CLIC2O15247 247 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms