RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 ZNF579Q8NAF0 562 aaKnown RBP16.04■□□□□ 0.16
MBD1-220ENST00000589758 PGBD4Q96DM1 585 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 KIF2CQ99661 725 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 C11orf16Q9NQ32 467 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 ENTPD7Q9NQZ7 604 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 RGL1Q9NZL6 768 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 HCN4Q9Y3Q4 1203 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 ARIH1Q9Y4X5 557 aaPredicted RBP16.04■□□□□ 0.16
MBD1-220ENST00000589758 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
MBD1-220ENST00000589758 FAM205CA6NFA0 338 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 PRR33A8MZF0 331 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 BTBD18B2RXH4 712 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 NEMFO60524 1076 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 SLITRK3O94933 977 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 RBM25P49756 843 aaKnown RBP16.03■□□□□ 0.16
MBD1-220ENST00000589758 CTTNQ14247 550 aaKnown RBP16.03■□□□□ 0.16
MBD1-220ENST00000589758 CALCRLQ16602 461 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 PLPP4Q5VZY2 271 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 GLB1LQ6UWU2 654 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 TMEM184AQ6ZMB5 413 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 DIS3L2Q8IYB7 885 aaKnown RBP16.03■□□□□ 0.16
MBD1-220ENST00000589758 SLC39A11Q8N1S5 342 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 PRPF31Q8WWY3 499 aaKnown RBP16.03■□□□□ 0.16
MBD1-220ENST00000589758 TMEM143Q96AN5 459 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 AGPAT5Q9NUQ2 364 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 RAPGEFL1Q9UHV5 662 aa16.03■□□□□ 0.16
MBD1-220ENST00000589758 BARX2Q9UMQ3 279 aaPredicted RBP16.03■□□□□ 0.16
MBD1-220ENST00000589758 FAM86C2PA6NEL3 165 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 SRGAP2CP0DJJ0 459 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 PBX3P40426 434 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 BCAR1P56945 870 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 CYP4A11Q02928 519 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 LAMTOR4Q0VGL1 99 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 KCNC3Q14003 757 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 MXD4Q14582 209 aaPredicted RBP16.02■□□□□ 0.16
MBD1-220ENST00000589758 EMC2Q15006 297 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 PCBP1Q15365 356 aaKnown RBP eCLIP16.02■□□□□ 0.16
MBD1-220ENST00000589758 TMC7Q7Z402 723 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 FERMT3Q86UX7 667 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 MTRQ99707 1265 aa16.02■□□□□ 0.16
MBD1-220ENST00000589758 EIF2AK1Q9BQI3 630 aaKnown RBP16.02■□□□□ 0.16
MBD1-220ENST00000589758 TTC12Q9H892 705 aaPredicted RBP16.02■□□□□ 0.16
MBD1-220ENST00000589758 JAK2O60674 1132 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 LYPLA2O95372 231 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 SMC1AQ14683 1233 aaKnown RBP16.01■□□□□ 0.15
MBD1-220ENST00000589758 SAFBQ15424 915 aaKnown RBP eCLIP16.01■□□□□ 0.15
MBD1-220ENST00000589758 NOMO2Q5JPE7 1267 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 RNF149Q8NC42 400 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 VN1R2Q8NFZ6 395 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 LPPQ93052 612 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 TMEM169Q96HH4 297 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 HSD17B14Q9BPX1 270 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 BACH2Q9BYV9 841 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 ANKEF1Q9NU02 776 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 USP15Q9Y4E8 981 aaPredicted RBP16.01■□□□□ 0.15
MBD1-220ENST00000589758 PCDHB2Q9Y5E7 798 aa16.01■□□□□ 0.15
MBD1-220ENST00000589758 HIDE1A8MVS5 230 aa16■□□□□ 0.15
MBD1-220ENST00000589758 ZBTB39O15060 712 aa16■□□□□ 0.15
MBD1-220ENST00000589758 ZC3H11AO75152 810 aaKnown RBP eCLIP16■□□□□ 0.15
MBD1-220ENST00000589758 OFD1O75665 1012 aa16■□□□□ 0.15
MBD1-220ENST00000589758 DGAT1O75907 488 aa16■□□□□ 0.15
MBD1-220ENST00000589758 HOXB8P17481 243 aaPredicted RBP16■□□□□ 0.15
MBD1-220ENST00000589758 TXKP42681 527 aa16■□□□□ 0.15
MBD1-220ENST00000589758 RNASELQ05823 741 aaKnown RBP16■□□□□ 0.15
MBD1-220ENST00000589758 POU5F1BQ06416 359 aa16■□□□□ 0.15
MBD1-220ENST00000589758 TFDP1Q14186 410 aa16■□□□□ 0.15
MBD1-220ENST00000589758 MRPL10Q7Z7H8 261 aaKnown RBP16■□□□□ 0.15
MBD1-220ENST00000589758 RNF135Q8IUD6 432 aa16■□□□□ 0.15
MBD1-220ENST00000589758 MRPL43Q8N983 215 aaKnown RBP16■□□□□ 0.15
MBD1-220ENST00000589758 CNNM3Q8NE01 707 aa16■□□□□ 0.15
MBD1-220ENST00000589758 URGCPQ8TCY9 931 aa16■□□□□ 0.15
MBD1-220ENST00000589758 CCDC43Q96MW1 224 aaKnown RBP16■□□□□ 0.15
MBD1-220ENST00000589758 MTMR9Q96QG7 549 aa16■□□□□ 0.15
MBD1-220ENST00000589758 LLPHQ9BRT6 129 aaKnown RBP16■□□□□ 0.15
MBD1-220ENST00000589758 PHF7Q9BWX1 381 aaPredicted RBP16■□□□□ 0.15
MBD1-220ENST00000589758 BMP2KQ9NSY1 1161 aaPredicted RBP16■□□□□ 0.15
MBD1-220ENST00000589758 TBC1D13Q9NVG8 400 aa16■□□□□ 0.15
MBD1-220ENST00000589758 CNTNAP2Q9UHC6 1331 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 ARID2Q68CP9 1835 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 LOC730098B7Z3J9 87 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 NT5C1B-RDH14C9J2C7 533 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 ERLIN2O94905 339 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 XRCC6P12956 609 aaKnown RBP eCLIP15.99■□□□□ 0.15
MBD1-220ENST00000589758 AXLP30530 894 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 HOXA11P31270 313 aaPredicted RBP15.99■□□□□ 0.15
MBD1-220ENST00000589758 TECP42680 631 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 FOSBP53539 338 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 NCBP1Q09161 790 aaKnown RBP15.99■□□□□ 0.15
MBD1-220ENST00000589758 GIT2Q14161 759 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 LONRF3Q496Y0 759 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 HERC4Q5GLZ8 1057 aaPredicted RBP15.99■□□□□ 0.15
MBD1-220ENST00000589758 ANKRD54Q6NXT1 300 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 CASP10Q92851 521 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 FAM122AQ96E09 287 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 NRDE2Q9H7Z3 1164 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 MINDY3Q9H8M7 445 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 UBN1Q9NPG3 1134 aa15.99■□□□□ 0.15
MBD1-220ENST00000589758 KANSL3Q9P2N6 904 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms