RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 ZSCAN20P17040 1043 aaPredicted RBP10.96□□□□□ -0.65
PTPN2-208ENST00000589216 DNAJB1P25685 340 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 HOXA11P31270 313 aaPredicted RBP10.96□□□□□ -0.65
PTPN2-208ENST00000589216 BMPR1AP36894 532 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 PBX3P40426 434 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 PTENP60484 403 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 GPM6BQ13491 265 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 PDIA5Q14554 519 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 SF3A1Q15459 793 aaKnown RBP10.96□□□□□ -0.65
PTPN2-208ENST00000589216 TWF2Q6IBS0 349 aaKnown RBP10.96□□□□□ -0.65
PTPN2-208ENST00000589216 DTHD1Q6ZMT9 781 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 SRGAP1Q7Z6B7 1085 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 IFNLR1Q8IU57 520 aaPredicted RBP10.96□□□□□ -0.65
PTPN2-208ENST00000589216 DAW1Q8N136 415 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 CPB2Q96IY4 423 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 SAMD11Q96NU1 681 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 CASD1Q96PB1 797 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 NACC1Q96RE7 527 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 PLIN2Q99541 437 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 KIFC3Q9BVG8 833 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 RUSC1Q9BVN2 902 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 CWH43Q9H720 699 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 ELAC1Q9H777 363 aaKnown RBP10.96□□□□□ -0.65
PTPN2-208ENST00000589216 USP20Q9Y2K6 914 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 PCDHGC5Q9Y5F6 944 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 CLIC4Q9Y696 253 aa10.96□□□□□ -0.65
PTPN2-208ENST00000589216 NCOR1O75376 2440 aa10.96□□□□□ -0.66
PTPN2-208ENST00000589216 TDRD15B5MCY1 1934 aaKnown RBP10.96□□□□□ -0.66
PTPN2-208ENST00000589216 LRRIQ4A6NIV6 560 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 INO80B-WBP1J3KQ70 363 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 ITGB1P05556 798 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 XRCC6P12956 609 aaKnown RBP eCLIP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 CYP11B2P19099 503 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 PDCP20941 246 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 MUTP22033 750 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 AFF1P51825 1210 aaKnown RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 CDC42EP1Q00587 391 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 TFF2Q03403 129 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 MAPK7Q13164 816 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 CAMK1Q14012 370 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 MXD4Q14582 209 aaPredicted RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 PTPAQ15257 358 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 ZRSR1Q15695 479 aaKnown RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 TMEM119Q4V9L6 283 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 HYIQ5T013 277 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 CDCA2Q69YH5 1023 aaPredicted RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 CDR2LQ86X02 465 aaPredicted RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 HSCBQ8IWL3 235 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 EXOC8Q8IYI6 725 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 MCPH1Q8NEM0 835 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 MRPL38Q96DV4 380 aaKnown RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 TRAIPQ9BWF2 469 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 EIF2AQ9BY44 585 aaKnown RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 RAB34Q9BZG1 259 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 INO80BQ9C086 356 aaPredicted RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 TMEM117Q9H0C3 514 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 ALG13Q9NP73 1137 aaKnown RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 FAM105AQ9NUU6 356 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 TYW1Q9NV66 732 aaKnown RBP10.95□□□□□ -0.66
PTPN2-208ENST00000589216 DACT1Q9NYF0 836 aa10.95□□□□□ -0.66
PTPN2-208ENST00000589216 TCF20Q9UGU0 1960 aaKnown RBP10.94□□□□□ -0.66
PTPN2-208ENST00000589216 ASAP2O43150 1006 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 STX6O43752 255 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 EYA4O95677 639 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 ARF4P18085 180 aaPredicted RBP10.94□□□□□ -0.66
PTPN2-208ENST00000589216 IRS1P35568 1242 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 PKP1Q13835 747 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 TFDP1Q14186 410 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
PTPN2-208ENST00000589216 KRT79Q5XKE5 535 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 ARL6IP4Q66PJ3 421 aaKnown RBP10.94□□□□□ -0.66
PTPN2-208ENST00000589216 USP49Q70CQ1 688 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 LRRC43Q8N309 656 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 KLHL23Q8NBE8 558 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 COLGALT1Q8NBJ5 622 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 SPRYD3Q8NCJ5 442 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 SMG8Q8ND04 991 aaKnown RBP10.94□□□□□ -0.66
PTPN2-208ENST00000589216 FOXD4L4Q8WXT5 416 aaPredicted RBP10.94□□□□□ -0.66
PTPN2-208ENST00000589216 USP28Q96RU2 1077 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 C11orf84Q9BUA3 381 aaPredicted RBP10.94□□□□□ -0.66
PTPN2-208ENST00000589216 CCDC113Q9H0I3 377 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 CHST12Q9NRB3 414 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 THEGQ9P2T0 379 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 PLAGL2Q9UPG8 496 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 HES2Q9Y543 173 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 PCDHB2Q9Y5E7 798 aa10.94□□□□□ -0.66
PTPN2-208ENST00000589216 CNTNAP2Q9UHC6 1331 aa10.93□□□□□ -0.66
PTPN2-208ENST00000589216 ERLIN2O94905 339 aa10.93□□□□□ -0.66
PTPN2-208ENST00000589216 MARCKSP29966 332 aaPredicted RBP10.93□□□□□ -0.66
PTPN2-208ENST00000589216 CEBPZQ03701 1054 aaKnown RBP10.93□□□□□ -0.66
PTPN2-208ENST00000589216 POU5F1BQ06416 359 aa10.93□□□□□ -0.66
PTPN2-208ENST00000589216 RAD51AP2Q09MP3 1159 aa10.93□□□□□ -0.66
PTPN2-208ENST00000589216 SKIV2LQ15477 1246 aaKnown RBP10.93□□□□□ -0.66
PTPN2-208ENST00000589216 TCEAL5Q5H9L2 206 aa10.93□□□□□ -0.66
PTPN2-208ENST00000589216 SPECC1Q5M775 1068 aa10.93□□□□□ -0.66
PTPN2-208ENST00000589216 AGMOQ6ZNB7 445 aa10.93□□□□□ -0.66
PTPN2-208ENST00000589216 FAM43BQ6ZT52 329 aaPredicted RBP10.93□□□□□ -0.66
PTPN2-208ENST00000589216 CABP7Q86V35 215 aa10.93□□□□□ -0.66
PTPN2-208ENST00000589216 TMEM173Q86WV6 379 aaPredicted RBP10.93□□□□□ -0.66
PTPN2-208ENST00000589216 P2RX5Q93086 422 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms