RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 NLRC5Q86WI3 1866 aa21.36■■□□□ 1.01
CIRBP-221ENST00000589161 ARHGEF35A5YM69 484 aa21.35■■□□□ 1.01
CIRBP-221ENST00000589161 ERLIN2O94905 339 aa21.35■■□□□ 1.01
CIRBP-221ENST00000589161 ATF7P17544 494 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-221ENST00000589161 UBE3AQ05086 875 aa21.35■■□□□ 1.01
CIRBP-221ENST00000589161 CLLU1OSQ5K130 101 aa21.35■■□□□ 1.01
CIRBP-221ENST00000589161 COLGALT1Q8NBJ5 622 aa21.35■■□□□ 1.01
CIRBP-221ENST00000589161 ASAP3Q8TDY4 903 aa21.35■■□□□ 1.01
CIRBP-221ENST00000589161 PGBD4Q96DM1 585 aa21.35■■□□□ 1.01
CIRBP-221ENST00000589161 MRPL9Q9BYD2 267 aaKnown RBP21.35■■□□□ 1.01
CIRBP-221ENST00000589161 NFKBIZQ9BYH8 718 aa21.35■■□□□ 1.01
CIRBP-221ENST00000589161 POLR3FQ9H1D9 316 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-221ENST00000589161 UBE2ZQ9H832 354 aaPredicted RBP21.35■■□□□ 1.01
CIRBP-221ENST00000589161 BMP1P13497 986 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 GLRA2P23416 452 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 AXLP30530 894 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 HOXA11P31270 313 aaPredicted RBP21.34■■□□□ 1.01
CIRBP-221ENST00000589161 CAPSQ13938 189 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 KRT79Q5XKE5 535 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 PADI6Q6TGC4 694 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 LRRC55Q6ZSA7 311 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 THNSL1Q8IYQ7 743 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 HELQQ8TDG4 1101 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 POF1BQ8WVV4 589 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 PPP2R3CQ969Q6 453 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 PCDHB2Q9Y5E7 798 aa21.34■■□□□ 1.01
CIRBP-221ENST00000589161 INO80B-WBP1J3KQ70 363 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 FGF18O76093 207 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 CYP11B2P19099 503 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 PDCP20941 246 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 ATP2C1P98194 919 aaPredicted RBP21.33■■□□□ 1.01
CIRBP-221ENST00000589161 CAMK1Q14012 370 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 GLB1LQ6UWU2 654 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 MAEAQ7L5Y9 396 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 SNX29Q8TEQ0 813 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 HCSTQ9UBK5 93 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 KIAA1024Q9UPX6 916 aa21.33■■□□□ 1.01
CIRBP-221ENST00000589161 DNAJB1P25685 340 aa21.32■■□□□ 1
CIRBP-221ENST00000589161 KCNQ1P51787 676 aa21.32■■□□□ 1
CIRBP-221ENST00000589161 ECM1Q16610 540 aa21.32■■□□□ 1
CIRBP-221ENST00000589161 KCNT2Q6UVM3 1135 aa21.32■■□□□ 1
CIRBP-221ENST00000589161 MRPL10Q7Z7H8 261 aaKnown RBP21.32■■□□□ 1
CIRBP-221ENST00000589161 CNNM3Q8NE01 707 aa21.32■■□□□ 1
CIRBP-221ENST00000589161 ADAMTS19Q8TE59 1207 aa21.32■■□□□ 1
CIRBP-221ENST00000589161 PABPC5Q96DU9 382 aaKnown RBP21.32■■□□□ 1
CIRBP-221ENST00000589161 CCDC51Q96ER9 411 aa21.32■■□□□ 1
CIRBP-221ENST00000589161 ZNF558Q96NG5 402 aa21.32■■□□□ 1
CIRBP-221ENST00000589161 GPRC5CQ9NQ84 441 aa21.32■■□□□ 1
CIRBP-221ENST00000589161 PUF60Q9UHX1 559 aaKnown RBP21.32■■□□□ 1
CIRBP-221ENST00000589161 FNDC1Q4ZHG4 1894 aaPredicted RBP21.31■■□□□ 1
CIRBP-221ENST00000589161 CARNS1A5YM72 827 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 TSPAN1O60635 241 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 PPM1AP35813 382 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 PLCB3Q01970 1234 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 MBTD1Q05BQ5 628 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 COL19A1Q14993 1142 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 IL17AQ16552 155 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 NOTUMQ6P988 496 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 BRAPQ7Z569 592 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 LPPQ93052 612 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 BHMT2Q9H2M3 363 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 DDX19AQ9NUU7 478 aaKnown RBP21.31■■□□□ 1
CIRBP-221ENST00000589161 DNM3Q9UQ16 869 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 LZTS1Q9Y250 596 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 GTF3C3Q9Y5Q9 886 aa21.31■■□□□ 1
CIRBP-221ENST00000589161 ARID2Q68CP9 1835 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 LRRIQ4A6NIV6 560 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 OFD1O75665 1012 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 CSPG5O95196 566 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 KCNA5P22460 613 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 KRT17Q04695 432 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 LEXMQ3ZCV2 418 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 LONRF3Q496Y0 759 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 NOMO2Q5JPE7 1267 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 UBXN11Q5T124 520 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 ARL6IP4Q66PJ3 421 aaKnown RBP21.3■■□□□ 1
CIRBP-221ENST00000589161 PDE12Q6L8Q7 609 aaKnown RBP21.3■■□□□ 1
CIRBP-221ENST00000589161 MICAL1Q8TDZ2 1067 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 UBN1Q9NPG3 1134 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 TLR9Q9NR96 1032 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 SPG21Q9NZD8 308 aa21.3■■□□□ 1
CIRBP-221ENST00000589161 CNTNAP2Q9UHC6 1331 aa21.29■■□□□ 1
CIRBP-221ENST00000589161 REV3LO60673 3130 aa21.29■■□□□ 1
CIRBP-221ENST00000589161 NCLP19338 710 aaKnown RBP21.29■■□□□ 1
CIRBP-221ENST00000589161 ALDH7A1P49419 539 aaKnown RBP21.29■■□□□ 1
CIRBP-221ENST00000589161 HYAL1Q12794 435 aa21.29■■□□□ 1
CIRBP-221ENST00000589161 PUS10Q3MIT2 529 aaKnown RBP21.29■■□□□ 1
CIRBP-221ENST00000589161 EP400NLQ6ZTU2 488 aa21.29■■□□□ 1
CIRBP-221ENST00000589161 ZBTB8OSQ8IWT0 167 aa21.29■■□□□ 1
CIRBP-221ENST00000589161 MRPS27Q92552 414 aaKnown RBP21.29■■□□□ 1
CIRBP-221ENST00000589161 INTS4Q96HW7 963 aaKnown RBP21.29■■□□□ 1
CIRBP-221ENST00000589161 UHRF1Q96T88 793 aaPredicted RBP21.29■■□□□ 1
CIRBP-221ENST00000589161 CSRNP2Q9H175 543 aa21.29■■□□□ 1
CIRBP-221ENST00000589161 C2orf40Q9H1Z8 148 aa21.29■■□□□ 1
CIRBP-221ENST00000589161 CLDND1Q9NY35 253 aa21.29■■□□□ 1
CIRBP-221ENST00000589161 PP2D1A8MPX8 630 aa21.28■■□□□ 1
CIRBP-221ENST00000589161 EYA4O95677 639 aa21.28■■□□□ 1
CIRBP-221ENST00000589161 BMP15O95972 392 aa21.28■■□□□ 1
CIRBP-221ENST00000589161 IRS1P35568 1242 aa21.28■■□□□ 1
CIRBP-221ENST00000589161 PPP2R5AQ15172 486 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms