RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 ZNF276Q8N554 614 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 CISD2Q8N5K1 135 aaKnown RBP4.82□□□□□ -1.64
SMAD4-207ENST00000589076 ARL8AQ96BM9 186 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 RPL10LQ96L21 214 aaKnown RBP4.82□□□□□ -1.64
SMAD4-207ENST00000589076 CELF4Q9BZC1 486 aaKnown RBP4.82□□□□□ -1.64
SMAD4-207ENST00000589076 GPRC5BQ9NZH0 403 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 SAMD15Q9P1V8 674 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 HECAQ9UBI9 543 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-207ENST00000589076 ZNHIT2Q9UHR6 403 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 PACSIN3Q9UKS6 424 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 DENND2AQ9ULE3 1009 aa4.82□□□□□ -1.64
SMAD4-207ENST00000589076 RBM8AQ9Y5S9 174 aaKnown RBP4.82□□□□□ -1.64
SMAD4-207ENST00000589076 XDHP47989 1333 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 FAM20BO75063 409 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 SDHAP31040 664 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 SLC25A3Q00325 362 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 TOB2Q14106 344 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-207ENST00000589076 DHCR24Q15392 516 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 GAGE13Q4V321 117 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 FKBP15Q5T1M5 1219 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 PIK3R6Q5UE93 754 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 ABHD17CQ6PCB6 329 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 UBR7Q8N806 425 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 IGSF22Q8N9C0 903 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 ANKRD53Q8N9V6 530 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 LEO1Q8WVC0 666 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-207ENST00000589076 ERCC4Q92889 916 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-207ENST00000589076 FAM193BQ96PV7 902 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-207ENST00000589076 ATP8A1Q9Y2Q0 1164 aa4.81□□□□□ -1.64
SMAD4-207ENST00000589076 PCSK5Q92824 1860 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 SLC12A8A0AV02 714 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 UBE2QL1A1L167 161 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 GOLGA6L22H0YM25 854 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 DAPK3O43293 454 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 KPNA6O60684 536 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 RECQL4O94761 1208 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 ABHD16AO95870 558 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 LMNAP02545 664 aaKnown RBP4.8□□□□□ -1.64
SMAD4-207ENST00000589076 FBLP22087 321 aaKnown RBP4.8□□□□□ -1.64
SMAD4-207ENST00000589076 ADRA1BP35368 520 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 SCNN1BP51168 640 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 TCIRG1Q13488 830 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 SAFB2Q14151 953 aaKnown RBP eCLIP4.8□□□□□ -1.64
SMAD4-207ENST00000589076 DGKDQ16760 1214 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 ARHGAP44Q17R89 818 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 STRIP1Q5VSL9 837 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 KCNV1Q6PIU1 500 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 MRGPREQ86SM8 312 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 PROKR1Q8TCW9 393 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 ATXN2LQ8WWM7 1075 aaKnown RBP4.8□□□□□ -1.64
SMAD4-207ENST00000589076 LENG9Q96B70 501 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 FOXB1Q99853 325 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 CABP5Q9NP86 173 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 IL23AQ9NPF7 189 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 MCM8Q9UJA3 840 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 COQ6Q9Y2Z9 468 aa4.8□□□□□ -1.64
SMAD4-207ENST00000589076 M0R2C6 588 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 CBX4O00257 560 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 MAFGO15525 162 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 GLRX3O76003 335 aaKnown RBP4.79□□□□□ -1.64
SMAD4-207ENST00000589076 POU3F3P20264 500 aaPredicted RBP4.79□□□□□ -1.64
SMAD4-207ENST00000589076 ALDH6A1Q02252 535 aaKnown RBP4.79□□□□□ -1.64
SMAD4-207ENST00000589076 ROM1Q03395 351 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 SART3Q15020 963 aaKnown RBP4.79□□□□□ -1.64
SMAD4-207ENST00000589076 SEC23AQ15436 765 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 TMEM177Q53S58 311 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 MBNL2Q5VZF2 373 aaKnown RBP4.79□□□□□ -1.64
SMAD4-207ENST00000589076 Q6ZPA2 131 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 OVCH1Q7RTY7 1134 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 DDX42Q86XP3 938 aaKnown RBP eCLIP4.79□□□□□ -1.64
SMAD4-207ENST00000589076 NOSTRINQ8IVI9 506 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 AFAP1L2Q8N4X5 818 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 OR2W6PQ8NHA6 318 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 B4GALT6Q9UBX8 382 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 SYNPO2Q9UMS6 1093 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 ZKSCAN5Q9Y2L8 839 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 B3GALT1Q9Y5Z6 326 aa4.79□□□□□ -1.64
SMAD4-207ENST00000589076 ZAR1LA6NP61 321 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 B3GALT2O43825 422 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 ZEB2O60315 1214 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 BRINP1O60477 761 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 EYA4O95677 639 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 F2P00734 622 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 JUNP05412 331 aaKnown RBP4.78□□□□□ -1.64
SMAD4-207ENST00000589076 ITGB1P05556 798 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 GNAT2P19087 354 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 CDK11BP21127 795 aaKnown RBP4.78□□□□□ -1.64
SMAD4-207ENST00000589076 CD38P28907 300 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 MECP2P51608 486 aaKnown RBP4.78□□□□□ -1.64
SMAD4-207ENST00000589076 COL10A1Q03692 680 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 STRA8Q7Z7C7 330 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 C2orf69Q8N8R5 385 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 CHST14Q8NCH0 376 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 ATL2Q8NHH9 583 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 USP7Q93009 1102 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 NAF1Q96HR8 494 aaKnown RBP4.78□□□□□ -1.64
SMAD4-207ENST00000589076 MNTQ99583 582 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.78□□□□□ -1.64
SMAD4-207ENST00000589076 CYP4F11Q9HBI6 524 aa4.78□□□□□ -1.64
SMAD4-207ENST00000589076 FZD1Q9UP38 647 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms