RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 CFAP221Q4G0U5 840 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 COG1Q8WTW3 980 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 NTPCRQ9BSD7 190 aaKnown RBP16.6■□□□□ 0.25
MBD1-217ENST00000588937 PCIF1Q9H4Z3 704 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 KMT5AQ9NQR1 393 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 AJAP1Q9UKB5 411 aaPredicted RBP16.6■□□□□ 0.25
MBD1-217ENST00000588937 TBX20Q9UMR3 447 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 NENFQ9UMX5 172 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 L1RE1Q9UN81 338 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 WDR81Q562E7 1941 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 PAPPA2Q9BXP8 1791 aa16.6■□□□□ 0.25
MBD1-217ENST00000588937 CCDC169A6NNP5 214 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 H0YCG3 227 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 EIF3JO75822 258 aaKnown RBP16.59■□□□□ 0.25
MBD1-217ENST00000588937 DGAT1O75907 488 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 H2AFZP0C0S5 128 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 RTP1P59025 263 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 FAM193AP78312 1265 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 MEI1Q5TIA1 1274 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 MIS18BP1Q6P0N0 1132 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 GJB7Q6PEY0 223 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 H2AFVQ71UI9 128 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 SPATA4Q8NEY3 305 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
MBD1-217ENST00000588937 CBWD1Q9BRT8 395 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 PACSIN1Q9BY11 444 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 GPRC5CQ9NQ84 441 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 FBXO40Q9UH90 709 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 ARID2Q68CP9 1835 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 EMSYQ7Z589 1322 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 GRID2IPA4D2P6 1211 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 TMEM150BA6NC51 233 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 IQCA1LA6NCM1 817 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 CES2O00748 559 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 EPHX2P34913 555 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 NPTX2P47972 431 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 MCCD1P59942 119 aaPredicted RBP16.59■□□□□ 0.25
MBD1-217ENST00000588937 STXBP2Q15833 593 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 USP37Q86T82 979 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 MAP4K3Q8IVH8 894 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 TMEM161BQ8NDZ6 487 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 SH2D3AQ9BRG2 576 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 ACBD3Q9H3P7 528 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 CSADQ9Y600 493 aa16.59■□□□□ 0.25
MBD1-217ENST00000588937 PFASO15067 1338 aa16.58■□□□□ 0.25
MBD1-217ENST00000588937 NCK2O43639 380 aa16.58■□□□□ 0.24
MBD1-217ENST00000588937 RGS20O76081 388 aa16.58■□□□□ 0.24
MBD1-217ENST00000588937 ICAM3P32942 547 aa16.58■□□□□ 0.24
MBD1-217ENST00000588937 NOP2P46087 812 aaKnown RBP16.58■□□□□ 0.24
MBD1-217ENST00000588937 C2orf54Q08AI8 447 aa16.58■□□□□ 0.24
MBD1-217ENST00000588937 SMC1AQ14683 1233 aaKnown RBP16.58■□□□□ 0.24
MBD1-217ENST00000588937 SWSAP1Q6NVH7 229 aa16.58■□□□□ 0.24
MBD1-217ENST00000588937 ABHD15Q6UXT9 468 aa16.58■□□□□ 0.24
MBD1-217ENST00000588937 TAF4BQ92750 862 aa16.58■□□□□ 0.24
MBD1-217ENST00000588937 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
MBD1-217ENST00000588937 DENND3A2RUS2 1198 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 DDX3XO00571 662 aaKnown RBP eCLIP16.57■□□□□ 0.244e-8■■■□□ 15.9
MBD1-217ENST00000588937 SCP2P22307 547 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 ACTR2P61160 394 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 ENPEPQ07075 957 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 PRKG1Q13976 671 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 VGLL4Q14135 290 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 GLE1Q53GS7 698 aaKnown RBP16.57■□□□□ 0.24
MBD1-217ENST00000588937 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.57■□□□□ 0.24
MBD1-217ENST00000588937 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
MBD1-217ENST00000588937 SULF1Q8IWU6 871 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 SYCE1Q8N0S2 351 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 ANKRD35Q8N283 1001 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 LMO3Q8TAP4 145 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 IFT74Q96LB3 600 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 UBXN6Q9BZV1 441 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 ATP6V0A4Q9HBG4 840 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 SEPT9Q9UHD8 586 aaPredicted RBP16.57■□□□□ 0.24
MBD1-217ENST00000588937 USP20Q9Y2K6 914 aa16.57■□□□□ 0.24
MBD1-217ENST00000588937 ZNF862O60290 1169 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 STBD1O95210 358 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 SUPT20HL2P0C7V6 817 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 TNFAIP3P21580 790 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 CXCR5P32302 372 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 RPS6KA1Q15418 735 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 EPC2Q52LR7 807 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 XKR3Q5GH77 459 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 LBX2Q6XYB7 198 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 PNMA8AQ86V59 439 aaPredicted RBP16.56■□□□□ 0.24
MBD1-217ENST00000588937 SLC30A5Q8TAD4 765 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 U2AF1L4Q8WU68 220 aaKnown RBP16.56■□□□□ 0.24
MBD1-217ENST00000588937 GPR88Q9GZN0 384 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 TAF1DQ9H5J8 278 aaPredicted RBP16.56■□□□□ 0.24
MBD1-217ENST00000588937 RNF216Q9NWF9 866 aaPredicted RBP16.56■□□□□ 0.24
MBD1-217ENST00000588937 TISP43B9A030 160 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 FTCDO95954 541 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 CNGA1P29973 690 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 MXI1P50539 228 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 DLG4P78352 724 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 PRKCEQ02156 737 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 KIF22Q14807 665 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 PHLDB3Q6NSJ2 640 aa16.56■□□□□ 0.24
MBD1-217ENST00000588937 RIOX2Q8IUF8 465 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms