RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 POF1BQ8WVV4 589 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 LPPQ93052 612 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 CASD1Q96PB1 797 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 INO80BQ9C086 356 aaPredicted RBP12.87□□□□□ -0.35
RFX1-204ENST00000588885 TMEM117Q9H0C3 514 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 ELAC1Q9H777 363 aaKnown RBP12.87□□□□□ -0.35
RFX1-204ENST00000588885 MINDY3Q9H8M7 445 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 IFT122Q9HBG6 1241 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 CHMP5Q9NZZ3 219 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 PCDHB12Q9Y5F1 795 aa12.87□□□□□ -0.35
RFX1-204ENST00000588885 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.86□□□□□ -0.35
RFX1-204ENST00000588885 MED24O75448 989 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 SPATA31C1P0DKV0 1188 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 FAM43BQ6ZT52 329 aaPredicted RBP12.86□□□□□ -0.35
RFX1-204ENST00000588885 RBM23Q86U06 439 aaKnown RBP12.86□□□□□ -0.35
RFX1-204ENST00000588885 FERMT3Q86UX7 667 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 CATSPER3Q86XQ3 398 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 EXOC8Q8IYI6 725 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 THNSL1Q8IYQ7 743 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 COLGALT1Q8NBJ5 622 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 TCP11Q8WWU5 503 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 MTRQ99707 1265 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 LMAN2LQ9H0V9 348 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 CWH43Q9H720 699 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 XPNPEP1Q9NQW7 623 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 CHST12Q9NRB3 414 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 AAASQ9NRG9 546 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 CLDND1Q9NY35 253 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 DACT1Q9NYF0 836 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 NOL7Q9UMY1 257 aaKnown RBP12.86□□□□□ -0.35
RFX1-204ENST00000588885 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
RFX1-204ENST00000588885 VPS37CA5D8V6 355 aaPredicted RBP12.85□□□□□ -0.35
RFX1-204ENST00000588885 MEIS3P2A8K0S8 358 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 HOXA2O43364 376 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
RFX1-204ENST00000588885 FGF18O76093 207 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 LYPLA2O95372 231 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 ATF7P17544 494 aaPredicted RBP12.85□□□□□ -0.35
RFX1-204ENST00000588885 SYT1P21579 422 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 SSTR3P32745 418 aaPredicted RBP12.85□□□□□ -0.35
RFX1-204ENST00000588885 PHKA2P46019 1235 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 TOB1P50616 345 aaPredicted RBP12.85□□□□□ -0.35
RFX1-204ENST00000588885 HYAL1Q12794 435 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 CLUL1Q15846 466 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 NAALADL2Q58DX5 795 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 FOXD4L5Q5VV16 416 aaPredicted RBP12.85□□□□□ -0.35
RFX1-204ENST00000588885 ADGRD2Q7Z7M1 963 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 ZNF598Q86UK7 904 aaKnown RBP12.85□□□□□ -0.35
RFX1-204ENST00000588885 C4orf32Q8N8J7 132 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 NEK9Q8TD19 979 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 ASAP3Q8TDY4 903 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 FOXD4L4Q8WXT5 416 aaPredicted RBP12.85□□□□□ -0.35
RFX1-204ENST00000588885 P2RX5Q93086 422 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 C1QTNF1Q9BXJ1 281 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 GPRC5CQ9NQ84 441 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 ANKEF1Q9NU02 776 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 MTMR6Q9Y217 621 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 INPP5FQ9Y2H2 1132 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 ZDHHC9Q9Y397 364 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 PCDHB6Q9Y5E3 794 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 COL4A6Q14031 1691 aa12.85□□□□□ -0.35
RFX1-204ENST00000588885 PER2O15055 1255 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 LINC01565O15544 149 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 ASAP2O43150 1006 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 STX6O43752 255 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 BRD1O95696 1058 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 EOMESO95936 686 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 U2AF2P26368 475 aaKnown RBP eCLIP12.84□□□□□ -0.35
RFX1-204ENST00000588885 HOXA11P31270 313 aaPredicted RBP12.84□□□□□ -0.35
RFX1-204ENST00000588885 RARRES1P49788 294 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 PTGDRQ13258 359 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 LEXMQ3ZCV2 418 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 PTCRAQ6ISU1 281 aaPredicted RBP12.84□□□□□ -0.35
RFX1-204ENST00000588885 SRGAP1Q7Z6B7 1085 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.84□□□□□ -0.35
RFX1-204ENST00000588885 PABPC5Q96DU9 382 aaKnown RBP12.84□□□□□ -0.35
RFX1-204ENST00000588885 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 POLR3FQ9H1D9 316 aaPredicted RBP12.84□□□□□ -0.35
RFX1-204ENST00000588885 POLD4Q9HCU8 107 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 FAM105AQ9NUU6 356 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 KIF3AQ9Y496 699 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 PCDHB2Q9Y5E7 798 aa12.84□□□□□ -0.35
RFX1-204ENST00000588885 NT5C1B-RDH14C9J2C7 533 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 H3BQV1 296 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 INO80B-WBP1J3KQ70 363 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 GAS2O43903 313 aaKnown RBP12.83□□□□□ -0.36
RFX1-204ENST00000588885 DGAT1O75907 488 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 LAG3P18627 525 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 GLRA2P23416 452 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 ARL2P36404 184 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 CCT6AP40227 531 aaKnown RBP12.83□□□□□ -0.36
RFX1-204ENST00000588885 NRIP1P48552 1158 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 TRAPPC10P48553 1259 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 ERVFC1P60507 584 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 NUCB2P80303 420 aa12.83□□□□□ -0.36
RFX1-204ENST00000588885 DLX2Q07687 328 aaPredicted RBP12.83□□□□□ -0.36
RFX1-204ENST00000588885 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
RFX1-204ENST00000588885 LARP1BQ659C4 914 aaKnown RBP12.83□□□□□ -0.36
RFX1-204ENST00000588885 KCNT2Q6UVM3 1135 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms