RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 APBA1Q02410 837 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 EMC2Q15006 297 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 LY6KQ17RY6 165 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 ARHGAP29Q52LW3 1261 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 SFMBT2Q5VUG0 894 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 GBP6Q6ZN66 633 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 KIAA1328Q86T90 577 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 GPIHBP1Q8IV16 184 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 SLC9A9Q8IVB4 645 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 FBXO16Q8IX29 292 aaPredicted RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 CCDC170Q8IYT3 715 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 C2orf69Q8N8R5 385 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 GPRC5AQ8NFJ5 357 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 ATRIPQ8WXE1 791 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 BRI3BPQ8WY22 251 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 BSNDQ8WZ55 320 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 SLC35C1Q96A29 364 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 BORCS6Q96GS4 357 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 MKNK1Q9BUB5 465 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 KIFC3Q9BVG8 833 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 POLR3FQ9H1D9 316 aaPredicted RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 PORCNQ9H237 461 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 GANQ9H2C0 597 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 ST6GALNAC4Q9H4F1 302 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 PCIF1Q9H4Z3 704 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 NHEJ1Q9H9Q4 299 aaPredicted RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 EFCC1Q9HA90 598 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 NLRC4Q9NPP4 1024 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 KMT5AQ9NQR1 393 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 CGNQ9P2M7 1197 aaKnown RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 EXOC7Q9UPT5 735 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 SLC45A1Q9Y2W3 748 aa9.58□□□□□ -0.88
SMAD4-206ENST00000588860 REXO2Q9Y3B8 237 aaKnown RBP9.58□□□□□ -0.88
SMAD4-206ENST00000588860 IGKV6D-21A0A0A0MT36 114 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 EIF3CLB5ME19 914 aaKnown RBP9.57□□□□□ -0.88
SMAD4-206ENST00000588860 TISP43B9A030 160 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 DYNC1I1O14576 645 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 KIF5CO60282 957 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 IPO7O95373 1038 aaKnown RBP9.57□□□□□ -0.88
SMAD4-206ENST00000588860 ARIH2O95376 493 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 PLEKP08567 350 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-206ENST00000588860 TGFB3P10600 412 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 ACTN1P12814 892 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 KRT13P13646 458 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 ATP4AP20648 1035 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 GTF2F1P35269 517 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMAD4-206ENST00000588860 KRT83P78385 493 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 RAPGEF1Q13905 1077 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 MYBPC2Q14324 1141 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 ASIC2Q16515 512 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 EXOC3L4Q17RC7 722 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 KCNV1Q6PIU1 500 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 METTL7BQ6UX53 244 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 ANKRD23Q86SG2 305 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 C12orf56Q8IXR9 622 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 ANKRD13CQ8N6S4 541 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 TMEM161BQ8NDZ6 487 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 SPIRE2Q8WWL2 714 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 IFT74Q96LB3 600 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 CCDC42Q96M95 316 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 WDR24Q96S15 920 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 EIF3CQ99613 913 aaKnown RBP9.57□□□□□ -0.88
SMAD4-206ENST00000588860 NUCKS1Q9H1E3 243 aaKnown RBP9.57□□□□□ -0.88
SMAD4-206ENST00000588860 DEF6Q9H4E7 631 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 MLXIPQ9HAP2 919 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 C17orf75Q9HAS0 396 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 XPNPEP1Q9NQW7 623 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 GCNT4Q9P109 453 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 DDX41Q9UJV9 622 aaKnown RBP9.57□□□□□ -0.88
SMAD4-206ENST00000588860 TBX20Q9UMR3 447 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 MAFBQ9Y5Q3 323 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-206ENST00000588860 ANK1P16157 1881 aa9.57□□□□□ -0.88
SMAD4-206ENST00000588860 LOC102724159A0A0B4J2E5 919 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 DENND3A2RUS2 1198 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 GTPBP10A4D1E9 387 aaKnown RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 ASB14A6NK59 587 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 H0YCG3 227 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 NOP56O00567 594 aaKnown RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 URI1O94763 535 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 TRIM49P0CI25 452 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 TRIM49CP0CI26 452 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 SLC9A1P19634 815 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 PON1P27169 355 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 TCF7P36402 384 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 EIF4A3P38919 411 aaKnown RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 ARHGAP25P42331 645 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 GCLCP48506 637 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 FMO5P49326 533 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 STAT5BP51692 787 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 RTP1P59025 263 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 SNRPFP62306 86 aaKnown RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 MYL7Q01449 175 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 BFSP1Q12934 665 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 PPP2R5AQ15172 486 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 PWP2Q15269 919 aaKnown RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 SPA17Q15506 151 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 ZNF569Q5MCW4 686 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 CELF3Q5SZQ8 465 aaKnown RBP9.56□□□□□ -0.88
SMAD4-206ENST00000588860 KLHDC7AQ5VTJ3 777 aa9.56□□□□□ -0.88
SMAD4-206ENST00000588860 SPRYD7Q5W111 196 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms