RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 NRCAMQ92823 1304 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 MYADML2A6NDP7 307 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 NR3C1P04150 777 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 SMIM10L2AP0DMW4 78 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 SMIM10L2BP0DMW5 78 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 NR2F2P24468 414 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 LAMTOR4Q0VGL1 99 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 KRT31Q15323 416 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.44■■□□□ 1.5
ATG4D-209ENST00000588857 DRC7Q8IY82 874 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 RNF208Q9H0X6 261 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 DDX20Q9UHI6 824 aaKnown RBP24.44■■□□□ 1.5
ATG4D-209ENST00000588857 KIAA0100Q14667 2235 aaKnown RBP24.44■■□□□ 1.5
ATG4D-209ENST00000588857 ADGRA3Q8IWK6 1321 aa24.44■■□□□ 1.5
ATG4D-209ENST00000588857 SIP14410 1827 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 HAS3O00219 553 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 ASAP2O43150 1006 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 GNA14O95837 355 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 TPM2P07951 284 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 CLCN3P51790 818 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 CAPSQ13938 189 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 TFDP1Q14186 410 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 FILIP1Q7Z7B0 1213 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 ZBTB10Q96DT7 871 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 NAP1L5Q96NT1 182 aaPredicted RBP24.43■■□□□ 1.5
ATG4D-209ENST00000588857 MTG1Q9BT17 334 aaPredicted RBP24.43■■□□□ 1.5
ATG4D-209ENST00000588857 SETD4Q9NVD3 440 aa24.43■■□□□ 1.5
ATG4D-209ENST00000588857 CGNQ9P2M7 1197 aaKnown RBP24.43■■□□□ 1.5
ATG4D-209ENST00000588857 LRRC10BA6NIK2 292 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 GJB1P08034 283 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 CDC25BP30305 580 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 MTIF2P46199 727 aaKnown RBP24.42■■□□□ 1.5
ATG4D-209ENST00000588857 SNRPFP62306 86 aaKnown RBP24.42■■□□□ 1.5
ATG4D-209ENST00000588857 STRN3Q13033 797 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 RHPN2Q8IUC4 686 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 MAP4K3Q8IVH8 894 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 ZC3H3Q8IXZ2 948 aaKnown RBP24.42■■□□□ 1.5
ATG4D-209ENST00000588857 UNC93B1Q9H1C4 597 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 IKZF4Q9H2S9 585 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 AGPAT3Q9NRZ7 376 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 K7ERI5 159 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 CLIC2O15247 247 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 MSCO60682 206 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 ADAMTS4O75173 837 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 MYCNP04198 464 aaPredicted RBP24.42■■□□□ 1.5
ATG4D-209ENST00000588857 SRGAP2CP0DJJ0 459 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 NFIL3Q16649 462 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 MARCH8Q5T0T0 291 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 LMBR1Q8WVP7 490 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 HMX1Q9NP08 348 aaPredicted RBP24.42■■□□□ 1.5
ATG4D-209ENST00000588857 TAB2Q9NYJ8 693 aa24.42■■□□□ 1.5
ATG4D-209ENST00000588857 TRIP12Q14669 1992 aaPredicted RBP24.41■■□□□ 1.5
ATG4D-209ENST00000588857 A0A1B0GTH6 734 aa24.41■■□□□ 1.5
ATG4D-209ENST00000588857 N4BP3O15049 544 aa24.41■■□□□ 1.5
ATG4D-209ENST00000588857 EFNA5P52803 228 aa24.41■■□□□ 1.5
ATG4D-209ENST00000588857 COPB1P53618 953 aaKnown RBP24.41■■□□□ 1.5
ATG4D-209ENST00000588857 CCDC40Q4G0X9 1142 aa24.41■■□□□ 1.5
ATG4D-209ENST00000588857 NFRKBQ6P4R8 1299 aa24.41■■□□□ 1.5
ATG4D-209ENST00000588857 APTXQ7Z2E3 356 aaKnown RBP24.41■■□□□ 1.5
ATG4D-209ENST00000588857 C7orf31Q8N865 590 aa24.41■■□□□ 1.5
ATG4D-209ENST00000588857 KCNN1Q92952 543 aa24.41■■□□□ 1.5
ATG4D-209ENST00000588857 TUBGCP2Q9BSJ2 902 aa24.41■■□□□ 1.5
ATG4D-209ENST00000588857 SCN10AQ9Y5Y9 1956 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 PRKCSHP14314 528 aaPredicted RBP24.4■■□□□ 1.5
ATG4D-209ENST00000588857 CXCL17Q6UXB2 119 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 ZBTB8OSQ8IWT0 167 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 LINC01465Q8N7H1 131 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 PCSK9Q8NBP7 692 aaKnown RBP24.4■■□□□ 1.5
ATG4D-209ENST00000588857 RNF149Q8NC42 400 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 MAP7D2Q96T17 732 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 C2orf40Q9H1Z8 148 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 VPS16Q9H269 839 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 TMEM134Q9H6X4 195 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 AKT3Q9Y243 479 aa24.4■■□□□ 1.5
ATG4D-209ENST00000588857 GNAT1P11488 350 aa24.39■■□□□ 1.5
ATG4D-209ENST00000588857 CST5P28325 142 aaPredicted RBP24.39■■□□□ 1.5
ATG4D-209ENST00000588857 GJA8P48165 433 aa24.39■■□□□ 1.5
ATG4D-209ENST00000588857 MYBPC2Q14324 1141 aa24.39■■□□□ 1.5
ATG4D-209ENST00000588857 NR1I3Q14994 352 aa24.39■■□□□ 1.5
ATG4D-209ENST00000588857 RNF180Q86T96 592 aa24.39■■□□□ 1.5
ATG4D-209ENST00000588857 SPC24Q8NBT2 197 aa24.39■■□□□ 1.5
ATG4D-209ENST00000588857 KLHDC9Q8NEP7 349 aa24.39■■□□□ 1.5
ATG4D-209ENST00000588857 BICD1Q96G01 975 aa24.39■■□□□ 1.5
ATG4D-209ENST00000588857 NLRP4Q96MN2 994 aa24.39■■□□□ 1.5
ATG4D-209ENST00000588857 PHLPP2Q6ZVD8 1323 aa24.39■■□□□ 1.49
ATG4D-209ENST00000588857 PTMAP06454 111 aaKnown RBP24.38■■□□□ 1.49
ATG4D-209ENST00000588857 KCNA10Q16322 511 aa24.38■■□□□ 1.49
ATG4D-209ENST00000588857 CEP135Q66GS9 1140 aa24.38■■□□□ 1.49
ATG4D-209ENST00000588857 SLC9A9Q8IVB4 645 aa24.38■■□□□ 1.49
ATG4D-209ENST00000588857 RTN4Q9NQC3 1192 aaKnown RBP24.38■■□□□ 1.49
ATG4D-209ENST00000588857 FRMPD3Q5JV73 1810 aa24.38■■□□□ 1.49
ATG4D-209ENST00000588857 C17orf102A2RUQ5 167 aa24.37■■□□□ 1.49
ATG4D-209ENST00000588857 PES1O00541 588 aaKnown RBP24.37■■□□□ 1.49
ATG4D-209ENST00000588857 HNRNPDLO14979 420 aaKnown RBP24.37■■□□□ 1.49
ATG4D-209ENST00000588857 SLC16A3O15427 465 aaKnown RBP24.37■■□□□ 1.49
ATG4D-209ENST00000588857 EPB41P11171 864 aaKnown RBP24.37■■□□□ 1.49
ATG4D-209ENST00000588857 CYP2J2P51589 502 aa24.37■■□□□ 1.49
ATG4D-209ENST00000588857 CDCA2Q69YH5 1023 aaPredicted RBP24.37■■□□□ 1.49
ATG4D-209ENST00000588857 TAS1R3Q7RTX0 852 aa24.37■■□□□ 1.49
ATG4D-209ENST00000588857 C12orf56Q8IXR9 622 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms