RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 CTTNQ14247 550 aaKnown RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 ERLEC1Q96DZ1 483 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 ZMYND12Q9H0C1 365 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 SCAF8Q9UPN6 1271 aaKnown RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 RFC1P35251 1148 aaPredicted RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 ALDH5A1P51649 535 aaPredicted RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 PLCB4Q15147 1175 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 HP1BP3Q5SSJ5 553 aaPredicted RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 FAM182AQ5T1J6 154 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 LRRC55Q6ZSA7 311 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 RAB3IL1Q8TBN0 382 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 LRRC45Q96CN5 670 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 GCNT4Q9P109 453 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 TBK1Q9UHD2 729 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 RGS16O15492 202 aaPredicted RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 RPS6KA4O75676 772 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 SMNDC1O75940 238 aaKnown RBP eCLIP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 NOL4O94818 638 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 GDF11O95390 407 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 KCNJ1P48048 391 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 MTM1Q13496 603 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 UBAP2Q5T6F2 1119 aaKnown RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 ADGRF4Q8IZF3 695 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 PRPF31Q8WWY3 499 aaKnown RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 RAPGEF5Q92565 580 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 NDNQ99608 321 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 SIKE1Q9BRV8 207 aa13.12□□□□□ -0.31
LRFN3-204ENST00000588831 CNOT8Q9UFF9 292 aaKnown RBP13.12□□□□□ -0.31
LRFN3-204ENST00000588831 SORBS3O60504 671 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 CALCAP01258 141 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 XRCC5P13010 732 aaKnown RBP13.11□□□□□ -0.31
LRFN3-204ENST00000588831 GJA8P48165 433 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 DMPKQ09013 629 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 FAM228AQ86W67 206 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 NMD3Q96D46 503 aaKnown RBP13.11□□□□□ -0.31
LRFN3-204ENST00000588831 CHMP6Q96FZ7 201 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 AJAP1Q9UKB5 411 aaPredicted RBP13.11□□□□□ -0.31
LRFN3-204ENST00000588831 BLOC1S6Q9UL45 172 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 PCDHAC2Q9Y5I4 1007 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 COL4A1P02462 1669 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 UBOX5O94941 541 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 FGFR4P22455 802 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 CCND1P24385 295 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 NMT1P30419 496 aaKnown RBP13.11□□□□□ -0.31
LRFN3-204ENST00000588831 MRPS35P82673 323 aaKnown RBP13.11□□□□□ -0.31
LRFN3-204ENST00000588831 COG2Q14746 738 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 C2CD6Q53TS8 623 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 GUF1Q8N442 669 aaKnown RBP13.11□□□□□ -0.31
LRFN3-204ENST00000588831 ANKS1AQ92625 1134 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 ZNF570Q96NI8 536 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 TRIM33Q9UPN9 1127 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 TNS2Q63HR2 1409 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 SKIP12755 728 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 PPP2R2AP63151 447 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 SLC18A3Q16572 532 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 C1QTNF12Q5T7M4 302 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 MIGA2Q7L4E1 593 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 MYCT1Q8N699 235 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 GSDMBQ8TAX9 411 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 MCUR1Q96AQ8 359 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 AK8Q96MA6 479 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 CARD9Q9H257 536 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 DBR1Q9UK59 544 aaKnown RBP13.11□□□□□ -0.31
LRFN3-204ENST00000588831 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
LRFN3-204ENST00000588831 GSTTP1A0A1W2PQM5 241 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 A0A1W2PRG0 241 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 MED24O75448 989 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 SF3B3Q15393 1217 aaKnown RBP13.1□□□□□ -0.31
LRFN3-204ENST00000588831 USP38Q8NB14 1042 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 SCFD1Q8WVM8 642 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 DNAJC9Q8WXX5 260 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 PLEKHG4BQ96PX9 1271 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 UBE2OQ9C0C9 1292 aaKnown RBP13.1□□□□□ -0.31
LRFN3-204ENST00000588831 TBCAO75347 108 aaKnown RBP13.1□□□□□ -0.31
LRFN3-204ENST00000588831 SHBGP04278 402 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 H2AFZP0C0S5 128 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 MESDQ14696 234 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 H2AFVQ71UI9 128 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 NR1H4Q96RI1 486 aaPredicted RBP13.1□□□□□ -0.31
LRFN3-204ENST00000588831 SMC6Q96SB8 1091 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 PLVAPQ9BX97 442 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 TAF1DQ9H5J8 278 aaPredicted RBP13.1□□□□□ -0.31
LRFN3-204ENST00000588831 CEP72Q9P209 647 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 KLHL14Q9P2G3 628 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 SPEF2Q9C093 1822 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 UCHL3P15374 230 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 RNASELQ05823 741 aaKnown RBP13.1□□□□□ -0.31
LRFN3-204ENST00000588831 TNIP1Q15025 636 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 LRRC36Q1X8D7 754 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 RINLQ6ZS11 566 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 CPNE8Q86YQ8 564 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 SCYL3Q8IZE3 742 aa13.1□□□□□ -0.31
LRFN3-204ENST00000588831 PPP1R1BQ9UD71 204 aaPredicted RBP13.1□□□□□ -0.31
LRFN3-204ENST00000588831 LAMB4A4D0S4 1761 aa13.09□□□□□ -0.31
LRFN3-204ENST00000588831 SUN1O94901 812 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms