RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 CYP4F8P98187 520 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 PRKCQQ04759 706 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 DBPQ10586 325 aaPredicted RBP9.29□□□□□ -0.92
VMP1-208ENST00000588617 NOLC1Q14978 699 aaKnown RBP eCLIP9.29□□□□□ -0.92
VMP1-208ENST00000588617 THEMIS2Q5TEJ8 643 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 APOA5Q6Q788 366 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 MIGA2Q7L4E1 593 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 SAPCD2Q86UD0 394 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 CD163Q86VB7 1156 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 GAB3Q8WWW8 586 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 KIAA1191Q96A73 305 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 LRRC27Q9C0I9 530 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 MTG2Q9H4K7 406 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 ARMT1Q9H993 441 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 MAP3K20Q9NYL2 800 aaKnown RBP9.29□□□□□ -0.92
VMP1-208ENST00000588617 ZNF69Q9UC07 566 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 DENND2AQ9ULE3 1009 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 TPCN1Q9ULQ1 816 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 PCDHA13Q9Y5I0 950 aa9.29□□□□□ -0.92
VMP1-208ENST00000588617 A0A088AWK7 358 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 NCK2O43639 380 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 IGLV1-40P01703 118 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 MCAMP43121 646 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 DSC2Q02487 901 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 SLC4A8Q2Y0W8 1093 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 FAM209BQ5JX69 171 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 IZUMO3Q5VZ72 239 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 PPP4R3AQ6IN85 833 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 BTNL9Q6UXG8 535 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 SPPL2CQ8IUH8 684 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 CALML6Q8TD86 181 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 APIPQ96GX9 242 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 NT5C1BQ96P26 610 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 C22orf23Q9BZE7 217 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 BTBD1Q9H0C5 482 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 TMX4Q9H1E5 349 aaPredicted RBP9.28□□□□□ -0.92
VMP1-208ENST00000588617 GREM2Q9H772 168 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 AS3MTQ9HBK9 375 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 EVLQ9UI08 416 aaPredicted RBP9.28□□□□□ -0.92
VMP1-208ENST00000588617 VAV3Q9UKW4 847 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 PCDHB6Q9Y5E3 794 aa9.28□□□□□ -0.92
VMP1-208ENST00000588617 MAFGO15525 162 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 RPLP2P05387 115 aaKnown RBP9.27□□□□□ -0.93
VMP1-208ENST00000588617 BDNFP23560 247 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 GRK6P43250 576 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 CHRNEQ04844 493 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 LDHAL6AQ6ZMR3 332 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 MMS22LQ6ZRQ5 1243 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 SYDE1Q6ZW31 735 aaPredicted RBP9.27□□□□□ -0.93
VMP1-208ENST00000588617 PLBD2Q8NHP8 589 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 ALPK1Q96QP1 1244 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 ZHX3Q9H4I2 956 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 LMCD1Q9NZU5 365 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 PIM2Q9P1W9 311 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 NUDT5Q9UKK9 219 aa9.27□□□□□ -0.93
VMP1-208ENST00000588617 GSC2O15499 205 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 FUT4P22083 530 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 PTGS1P23219 599 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 STT3AP46977 705 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 RAB1AP62820 205 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 GAREM2Q75VX8 874 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 TTC7BQ86TV6 843 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 DRC7Q8IY82 874 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 CDYL2Q8N8U2 506 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 NOL10Q9BSC4 688 aaKnown RBP9.26□□□□□ -0.93
VMP1-208ENST00000588617 KIAA1586Q9HCI6 787 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 STARD7Q9NQZ5 370 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 SWAP70Q9UH65 585 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 TMEM59LQ9UK28 342 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 SYNPO2Q9UMS6 1093 aa9.26□□□□□ -0.93
VMP1-208ENST00000588617 SLC16A6O15403 523 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 TLR5O60602 858 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 MPIG6BO95866 241 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 FOSL1P15407 271 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 XPAP23025 273 aaPredicted RBP9.25□□□□□ -0.93
VMP1-208ENST00000588617 GATA4P43694 442 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 GPR15P49685 360 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 HK2P52789 917 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 ZNF543Q08ER8 600 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 FGL2Q14314 439 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 NOMO1Q15155 1222 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 GPR155Q7Z3F1 870 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 MYCT1Q8N699 235 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 GLB1L3Q8NCI6 653 aaPredicted RBP9.25□□□□□ -0.93
VMP1-208ENST00000588617 PEX11GQ96HA9 241 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 C7orf25Q9BPX7 421 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 ZMAT3Q9HA38 289 aaKnown RBP9.25□□□□□ -0.93
VMP1-208ENST00000588617 ATP6V0A4Q9HBG4 840 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 SLC39A2Q9NP94 309 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 FTSJ1Q9UET6 329 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 STAP2Q9UGK3 403 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.25□□□□□ -0.93
VMP1-208ENST00000588617 SCOCQ9UIL1 159 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 PCDHB1Q9Y5F3 818 aa9.25□□□□□ -0.93
VMP1-208ENST00000588617 ZC3H12DA2A288 527 aaKnown RBP9.24□□□□□ -0.93
VMP1-208ENST00000588617 NOTOA8MTQ0 251 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 OPHN1O60890 802 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 RPL17P18621 184 aaKnown RBP9.24□□□□□ -0.93
VMP1-208ENST00000588617 CD96P40200 585 aa9.24□□□□□ -0.93
VMP1-208ENST00000588617 MAPK10P53779 464 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms