RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CATSPER4Q7RTX7 472 aa21.69■■□□□ 1.06
TRAF4-216ENST00000586813 NEK8Q86SG6 692 aa21.69■■□□□ 1.06
TRAF4-216ENST00000586813 SUGP1Q8IWZ8 645 aaKnown RBP21.69■■□□□ 1.06
TRAF4-216ENST00000586813 SLC7A3Q8WY07 619 aa21.69■■□□□ 1.06
TRAF4-216ENST00000586813 FAM20AQ96MK3 541 aa21.69■■□□□ 1.06
TRAF4-216ENST00000586813 ZBP1Q9H171 429 aa21.69■■□□□ 1.06
TRAF4-216ENST00000586813 IFT122Q9HBG6 1241 aa21.69■■□□□ 1.06
TRAF4-216ENST00000586813 TBC1D13Q9NVG8 400 aa21.69■■□□□ 1.06
TRAF4-216ENST00000586813 STK36Q9NRP7 1315 aa21.69■■□□□ 1.06
TRAF4-216ENST00000586813 CARNS1A5YM72 827 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 MEIS3P2A8K0S8 358 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 DKC1O60832 514 aaKnown RBP eCLIP21.68■■□□□ 1.06
TRAF4-216ENST00000586813 GCFC2P16383 781 aaKnown RBP21.68■■□□□ 1.06
TRAF4-216ENST00000586813 NPEPPSP55786 919 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 NOMO2Q5JPE7 1267 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 PPP4R3AQ6IN85 833 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 VPS52Q8N1B4 723 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 FBXL6Q8N531 539 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 ASIC4Q96FT7 647 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 ADAM7Q9H2U9 754 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 AGPAT5Q9NUQ2 364 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 WRAP73Q9P2S5 460 aaPredicted RBP21.68■■□□□ 1.06
TRAF4-216ENST00000586813 INPP5FQ9Y2H2 1132 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 COL4A3BPQ9Y5P4 624 aa21.68■■□□□ 1.06
TRAF4-216ENST00000586813 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.67■■□□□ 1.06
TRAF4-216ENST00000586813 ZNF623O75123 536 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 CXCL14O95715 111 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 ITIH3Q06033 890 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 CES5AQ6NT32 575 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 ZNF579Q8NAF0 562 aaKnown RBP21.67■■□□□ 1.06
TRAF4-216ENST00000586813 PRSS33Q8NF86 280 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 IGSF21Q96ID5 467 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 CEP170P1Q96L14 293 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 NECTIN4Q96NY8 510 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 SLKQ9H2G2 1235 aaPredicted RBP21.67■■□□□ 1.06
TRAF4-216ENST00000586813 POMKQ9H5K3 350 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 NRDE2Q9H7Z3 1164 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 NR2E1Q9Y466 385 aa21.67■■□□□ 1.06
TRAF4-216ENST00000586813 ZDBF2Q9HCK1 2354 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 CCNT1O60563 726 aaKnown RBP21.66■■□□□ 1.06
TRAF4-216ENST00000586813 OFD1O75665 1012 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 P4HBP07237 508 aaKnown RBP21.66■■□□□ 1.06
TRAF4-216ENST00000586813 GALTP07902 379 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 CTSAP10619 480 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 XBP1P17861 261 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 POLGP54098 1239 aaPredicted RBP21.66■■□□□ 1.06
TRAF4-216ENST00000586813 RNASELQ05823 741 aaKnown RBP21.66■■□□□ 1.06
TRAF4-216ENST00000586813 IER5LQ5T953 404 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 DDX53Q86TM3 631 aaKnown RBP21.66■■□□□ 1.06
TRAF4-216ENST00000586813 BCL7CQ8WUZ0 217 aaPredicted RBP21.66■■□□□ 1.06
TRAF4-216ENST00000586813 PSPC1Q8WXF1 523 aaKnown RBP21.66■■□□□ 1.06
TRAF4-216ENST00000586813 AUTS2Q8WXX7 1259 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 LXNQ9BS40 222 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 DHX33Q9H6R0 707 aaKnown RBP21.66■■□□□ 1.06
TRAF4-216ENST00000586813 TSHZ2Q9NRE2 1034 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 GJB4Q9NTQ9 266 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 PPME1Q9Y570 386 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 PCDHB2Q9Y5E7 798 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 IRAK3Q9Y616 596 aa21.66■■□□□ 1.06
TRAF4-216ENST00000586813 TBX3O15119 743 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 RFC5P40937 340 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 GIT2Q14161 759 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 PIK3AP1Q6ZUJ8 805 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 ZBTB33Q86T24 672 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 EXOC8Q8IYI6 725 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 OXER1Q8TDS5 423 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 HAS1Q92839 578 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 TMEM143Q96AN5 459 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 PGBD4Q96DM1 585 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 GBP3Q9H0R5 595 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 DZANK1Q9NVP4 752 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 DNAJB4Q9UDY4 337 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 MYO10Q9HD67 2058 aa21.65■■□□□ 1.06
TRAF4-216ENST00000586813 B4GALT3O60512 393 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 SLC11A1P49279 550 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 AGMOQ6ZNB7 445 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 C4orf19Q8IY42 314 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 TMEM87AQ8NBN3 555 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 URGCPQ8TCY9 931 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 PRPF31Q8WWY3 499 aaKnown RBP21.64■■□□□ 1.05
TRAF4-216ENST00000586813 NAP1L4Q99733 375 aaKnown RBP21.64■■□□□ 1.05
TRAF4-216ENST00000586813 PRRX2Q99811 253 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 MINDY3Q9H8M7 445 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 BMP2KQ9NSY1 1161 aaPredicted RBP21.64■■□□□ 1.05
TRAF4-216ENST00000586813 TPCN1Q9ULQ1 816 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 C2orf16Q68DN1 1984 aa21.64■■□□□ 1.05
TRAF4-216ENST00000586813 TDRD15B5MCY1 1934 aaKnown RBP21.64■■□□□ 1.05
TRAF4-216ENST00000586813 PFKFB2O60825 505 aa21.63■■□□□ 1.05
TRAF4-216ENST00000586813 DTNBO60941 627 aa21.63■■□□□ 1.05
TRAF4-216ENST00000586813 SRGAP2CP0DJJ0 459 aa21.63■■□□□ 1.05
TRAF4-216ENST00000586813 EPCAMP16422 314 aa21.63■■□□□ 1.05
TRAF4-216ENST00000586813 YWHABP31946 246 aaKnown RBP21.63■■□□□ 1.05
TRAF4-216ENST00000586813 MTHFRP42898 656 aa21.63■■□□□ 1.05
TRAF4-216ENST00000586813 PTPN5P54829 565 aa21.63■■□□□ 1.05
TRAF4-216ENST00000586813 LAMTOR4Q0VGL1 99 aa21.63■■□□□ 1.05
TRAF4-216ENST00000586813 EMC2Q15006 297 aa21.63■■□□□ 1.05
TRAF4-216ENST00000586813 EPHA7Q15375 998 aa21.63■■□□□ 1.05
TRAF4-216ENST00000586813 RARS2Q5T160 578 aaKnown RBP21.63■■□□□ 1.05
TRAF4-216ENST00000586813 NCAPH2Q6IBW4 605 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms