RNA–Protein interactions for RNA: ENST00000586636.5

CIRBP-210, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-210ENST00000586636 SMC1AQ14683 1233 aaKnown RBP20.52■□□□□ 0.88
CIRBP-210ENST00000586636 LONRF3Q496Y0 759 aa20.52■□□□□ 0.88
CIRBP-210ENST00000586636 EARS2Q5JPH6 523 aaKnown RBP20.52■□□□□ 0.88
CIRBP-210ENST00000586636 LLGL2Q6P1M3 1020 aa20.52■□□□□ 0.88
CIRBP-210ENST00000586636 TMEM184AQ6ZMB5 413 aa20.52■□□□□ 0.88
CIRBP-210ENST00000586636 SLFN12Q8IYM2 578 aa20.52■□□□□ 0.88
CIRBP-210ENST00000586636 ZNF579Q8NAF0 562 aaKnown RBP20.52■□□□□ 0.88
CIRBP-210ENST00000586636 RSPH1Q8WYR4 309 aa20.52■□□□□ 0.88
CIRBP-210ENST00000586636 LPPQ93052 612 aa20.52■□□□□ 0.88
CIRBP-210ENST00000586636 LXNQ9BS40 222 aa20.52■□□□□ 0.88
CIRBP-210ENST00000586636 PHF7Q9BWX1 381 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-210ENST00000586636 FAM105AQ9NUU6 356 aa20.52■□□□□ 0.88
CIRBP-210ENST00000586636 WRAP73Q9P2S5 460 aaPredicted RBP20.52■□□□□ 0.88
CIRBP-210ENST00000586636 TRIOO75962 3097 aa20.52■□□□□ 0.87
CIRBP-210ENST00000586636 LOC730098B7Z3J9 87 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 ZC3H11AO75152 810 aaKnown RBP eCLIP20.51■□□□□ 0.873e-7■■□□□ 12.2
CIRBP-210ENST00000586636 CA8P35219 290 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 RFC5P40937 340 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 BCAR1P56945 870 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 NR5A1Q13285 461 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 KCNC3Q14003 757 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 ANKRD54Q6NXT1 300 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 OTUD6AQ7L8S5 288 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 C4orf19Q8IY42 314 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 NECAB1Q8N987 351 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 PSPC1Q8WXF1 523 aaKnown RBP20.51■□□□□ 0.87
CIRBP-210ENST00000586636 TMEM169Q96HH4 297 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 DHX33Q9H6R0 707 aaKnown RBP20.51■□□□□ 0.87
CIRBP-210ENST00000586636 IFT122Q9HBG6 1241 aa20.51■□□□□ 0.87
CIRBP-210ENST00000586636 BMP2KQ9NSY1 1161 aaPredicted RBP20.51■□□□□ 0.87
CIRBP-210ENST00000586636 FAM205CA6NFA0 338 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 FDPSP14324 419 aaKnown RBP20.5■□□□□ 0.87
CIRBP-210ENST00000586636 YWHABP31946 246 aaKnown RBP20.5■□□□□ 0.87
CIRBP-210ENST00000586636 RBM25P49756 843 aaKnown RBP20.5■□□□□ 0.87
CIRBP-210ENST00000586636 BMS1Q14692 1282 aaKnown RBP20.5■□□□□ 0.87
CIRBP-210ENST00000586636 ME3Q16798 604 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 GLB1LQ6UWU2 654 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 SUSD6Q92537 303 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 TMEM143Q96AN5 459 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 DYDC2Q96IM9 177 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 RPGRIP1Q96KN7 1286 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 ZSWIM4Q9H7M6 989 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 AGPAT5Q9NUQ2 364 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 RGL1Q9NZL6 768 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 INPP5FQ9Y2H2 1132 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 TECTAO75443 2155 aa20.5■□□□□ 0.87
CIRBP-210ENST00000586636 ZNF623O75123 536 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 LARGE1O95461 756 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 SRGAP2CP0DJJ0 459 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 CYP4A11Q02928 519 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 RNASELQ05823 741 aaKnown RBP20.49■□□□□ 0.87
CIRBP-210ENST00000586636 CTTNQ14247 550 aaKnown RBP20.49■□□□□ 0.87
CIRBP-210ENST00000586636 CBX2Q14781 532 aaPredicted RBP20.49■□□□□ 0.87
CIRBP-210ENST00000586636 EMC2Q15006 297 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 XKR9Q5GH70 373 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 SRGAP1Q7Z6B7 1085 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 MRPL43Q8N983 215 aaKnown RBP20.49■□□□□ 0.87
CIRBP-210ENST00000586636 TCP11Q8WWU5 503 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 PRPF31Q8WWY3 499 aaKnown RBP20.49■□□□□ 0.87
CIRBP-210ENST00000586636 CASP10Q92851 521 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 GTF3C6Q969F1 213 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 PGBD4Q96DM1 585 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 APOL5Q9BWW9 433 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 TBC1D13Q9NVG8 400 aa20.49■□□□□ 0.87
CIRBP-210ENST00000586636 MUC6Q6W4X9 2439 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 CARNS1A5YM72 827 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 C2orf71A6NGG8 1288 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 MEIS3P2A8K0S8 358 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 GAS2O43903 313 aaKnown RBP20.48■□□□□ 0.87
CIRBP-210ENST00000586636 HOXB8P17481 243 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-210ENST00000586636 SPIRE1Q08AE8 756 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 LAMTOR4Q0VGL1 99 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 NOMO2Q5JPE7 1267 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 SYCE2Q6PIF2 218 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 HFE2Q6ZVN8 426 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 TPH2Q8IWU9 490 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 EDAQ92838 391 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 TNFRSF25Q93038 417 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 MTRQ99707 1265 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 S1PR5Q9H228 398 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 NRDE2Q9H7Z3 1164 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 PCDHB2Q9Y5E7 798 aa20.48■□□□□ 0.87
CIRBP-210ENST00000586636 ASAP2O43150 1006 aa20.47■□□□□ 0.87
CIRBP-210ENST00000586636 OFD1O75665 1012 aa20.47■□□□□ 0.87
CIRBP-210ENST00000586636 CXCL14O95715 111 aa20.47■□□□□ 0.87
CIRBP-210ENST00000586636 FERMT3Q86UX7 667 aa20.47■□□□□ 0.87
CIRBP-210ENST00000586636 VPS52Q8N1B4 723 aa20.47■□□□□ 0.87
CIRBP-210ENST00000586636 RNF149Q8NC42 400 aa20.47■□□□□ 0.87
CIRBP-210ENST00000586636 NSUN7Q8NE18 718 aaKnown RBP20.47■□□□□ 0.87
CIRBP-210ENST00000586636 GBP3Q9H0R5 595 aa20.47■□□□□ 0.87
CIRBP-210ENST00000586636 MINDY3Q9H8M7 445 aa20.47■□□□□ 0.87
CIRBP-210ENST00000586636 HCFC2Q9Y5Z7 792 aa20.47■□□□□ 0.87
CIRBP-210ENST00000586636 ZNF318Q5VUA4 2279 aa20.46■□□□□ 0.87
CIRBP-210ENST00000586636 ZBTB39O15060 712 aa20.46■□□□□ 0.87
CIRBP-210ENST00000586636 CLASP2O75122 1294 aaKnown RBP20.46■□□□□ 0.87
CIRBP-210ENST00000586636 FOSBP53539 338 aa20.46■□□□□ 0.87
CIRBP-210ENST00000586636 CALCRLQ16602 461 aa20.46■□□□□ 0.87
CIRBP-210ENST00000586636 TMEM173Q86WV6 379 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-210ENST00000586636 TMEM87AQ8NBN3 555 aa20.46■□□□□ 0.87
CIRBP-210ENST00000586636 URGCPQ8TCY9 931 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms