RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 FSCN1Q16658 493 aaKnown RBP22.4■■□□□ 1.18
ATG4D-204ENST00000586417 MTERF2Q49AM1 385 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 LHX8Q68G74 356 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 HAUS6Q7Z4H7 955 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 MCPH1Q8NEM0 835 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 BSNDQ8WZ55 320 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 C16orf70Q9BSU1 422 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 NIFKQ9BYG3 293 aaKnown RBP22.4■■□□□ 1.18
ATG4D-204ENST00000586417 ATP6V0A4Q9HBG4 840 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.4■■□□□ 1.18
ATG4D-204ENST00000586417 FRMPD3Q5JV73 1810 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 SLC16A4O15374 487 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 ADAMTS4O75173 837 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 KRT9P35527 623 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 NPTX2P47972 431 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 RTP1P59025 263 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 DGKDQ16760 1214 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 FAM160B1Q5W0V3 765 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 HS2ST1Q7LGA3 356 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 GOLGA5Q8TBA6 731 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 SPIRE2Q8WWL2 714 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 NUP58Q9BVL2 599 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 NAA15Q9BXJ9 866 aaKnown RBP22.4■■□□□ 1.18
ATG4D-204ENST00000586417 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.4■■□□□ 1.18
ATG4D-204ENST00000586417 UPF3AQ9H1J1 476 aaKnown RBP22.4■■□□□ 1.18
ATG4D-204ENST00000586417 AZI2Q9H6S1 392 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 C17orf75Q9HAS0 396 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 ARMCX3Q9UH62 379 aaPredicted RBP22.4■■□□□ 1.18
ATG4D-204ENST00000586417 EMSYQ7Z589 1322 aa22.4■■□□□ 1.18
ATG4D-204ENST00000586417 GNASQ5JWF2 1037 aa22.39■■□□□ 1.17
ATG4D-204ENST00000586417 CCDC155Q8N6L0 562 aa22.39■■□□□ 1.17
ATG4D-204ENST00000586417 SLC17A8Q8NDX2 589 aa22.39■■□□□ 1.17
ATG4D-204ENST00000586417 TMEM161BQ8NDZ6 487 aa22.39■■□□□ 1.17
ATG4D-204ENST00000586417 BORCS6Q96GS4 357 aa22.39■■□□□ 1.17
ATG4D-204ENST00000586417 ACCSQ96QU6 501 aa22.39■■□□□ 1.17
ATG4D-204ENST00000586417 DNAJC7Q99615 494 aa22.39■■□□□ 1.17
ATG4D-204ENST00000586417 NTPCRQ9BSD7 190 aaKnown RBP22.39■■□□□ 1.17
ATG4D-204ENST00000586417 DHX33Q9H6R0 707 aaKnown RBP22.39■■□□□ 1.17
ATG4D-204ENST00000586417 TMEM206Q9H813 350 aa22.39■■□□□ 1.17
ATG4D-204ENST00000586417 MYCNP04198 464 aaPredicted RBP22.38■■□□□ 1.17
ATG4D-204ENST00000586417 CPT1AP50416 773 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 TARBP2Q15633 366 aaKnown RBP22.38■■□□□ 1.17
ATG4D-204ENST00000586417 SLC9A9Q8IVB4 645 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 TMEM174Q8WUU8 243 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 SMARCAD1Q9H4L7 1026 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 LUC7L2Q9Y383 392 aaKnown RBP22.38■■□□□ 1.17
ATG4D-204ENST00000586417 A0A1W2PQJ5 194 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 TRIM21P19474 475 aaKnown RBP22.38■■□□□ 1.17
ATG4D-204ENST00000586417 KCNMA1Q12791 1236 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 DMP1Q13316 513 aaPredicted RBP22.38■■□□□ 1.17
ATG4D-204ENST00000586417 EMC2Q15006 297 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.38■■□□□ 1.17
ATG4D-204ENST00000586417 PLPPR4Q7Z2D5 763 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 SYCP3Q8IZU3 236 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 MKNK1Q9BUB5 465 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 RNPEPQ9H4A4 650 aa22.38■■□□□ 1.17
ATG4D-204ENST00000586417 METTL14Q9HCE5 456 aaKnown RBP22.38■■□□□ 1.17
ATG4D-204ENST00000586417 TRMT1Q9NXH9 659 aaKnown RBP22.38■■□□□ 1.17
ATG4D-204ENST00000586417 EPHB6O15197 1021 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 MYL3P08590 195 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 EPB41P11171 864 aaKnown RBP22.37■■□□□ 1.17
ATG4D-204ENST00000586417 CCL5P13501 91 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 NKX3-2P78367 333 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 MYBPC2Q14324 1141 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 PKN2Q16513 984 aaKnown RBP22.37■■□□□ 1.17
ATG4D-204ENST00000586417 PPP1R13LQ8WUF5 828 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 KAT2BQ92831 832 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 HVCN1Q96D96 273 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 IQCDQ96DY2 449 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 PCMTD1Q96MG8 357 aaPredicted RBP22.37■■□□□ 1.17
ATG4D-204ENST00000586417 KIFC3Q9BVG8 833 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 PAK6Q9NQU5 681 aaPredicted RBP22.37■■□□□ 1.17
ATG4D-204ENST00000586417 AGPAT5Q9NUQ2 364 aa22.37■■□□□ 1.17
ATG4D-204ENST00000586417 SOWAHDA6NJG2 315 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 PSMC2P35998 433 aaKnown RBP22.36■■□□□ 1.17
ATG4D-204ENST00000586417 SMTNP53814 917 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 POLGP54098 1239 aaPredicted RBP22.36■■□□□ 1.17
ATG4D-204ENST00000586417 PPP2R3AQ06190 1150 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 KCNH2Q12809 1159 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 MTF1Q14872 753 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 PLCB4Q15147 1175 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 RAD9BQ6WBX8 426 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 C12orf56Q8IXR9 622 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 KLHDC9Q8NEP7 349 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 OR8K1Q8NGG5 319 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 PPP1R13BQ96KQ4 1090 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 RNF208Q9H0X6 261 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 POLR3FQ9H1D9 316 aaPredicted RBP22.36■■□□□ 1.17
ATG4D-204ENST00000586417 SPC25Q9HBM1 224 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 NRBP2Q9NSY0 501 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 ADGRA3Q8IWK6 1321 aa22.36■■□□□ 1.17
ATG4D-204ENST00000586417 CCDC169A6NNP5 214 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 TISP43B9A030 160 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 H3BRB1 525 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 ZBED6P86452 979 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 TOGARAM2Q6ZUX3 1019 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 NYAP1Q6ZVC0 841 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 MAP4K3Q8IVH8 894 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 FAM186BQ8IYM0 893 aa22.35■■□□□ 1.17
ATG4D-204ENST00000586417 SLC35C1Q96A29 364 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms