RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 SCLYQ96I15 445 aa15.02■□□□□ -0
VMP1-203ENST00000586245 GSDMAQ96QA5 445 aa15.02■□□□□ -0
VMP1-203ENST00000586245 NTPCRQ9BSD7 190 aaKnown RBP15.02■□□□□ -0
VMP1-203ENST00000586245 KIFC3Q9BVG8 833 aa15.02■□□□□ -0
VMP1-203ENST00000586245 WNT8AQ9H1J5 351 aa15.02■□□□□ -0
VMP1-203ENST00000586245 IFT122Q9HBG6 1241 aa15.02■□□□□ -0
VMP1-203ENST00000586245 OLFML3Q9NRN5 406 aa15.02■□□□□ -0
VMP1-203ENST00000586245 SQORQ9Y6N5 450 aa15.02■□□□□ -0
VMP1-203ENST00000586245 K7ERI5 159 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 GPR182O15218 404 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 SYN1P17600 705 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 SFPQP23246 707 aaKnown RBP eCLIP15.01□□□□□ -0.01
VMP1-203ENST00000586245 RGS19P49795 217 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 PSMD2Q13200 908 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 KCNB1Q14721 858 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 MAPK6Q16659 721 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 KLHL40Q2TBA0 621 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 FAM26FQ5R3K3 315 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 CCDC183Q5T5S1 534 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 MFSD5Q6N075 450 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 TSHZ1Q6ZSZ6 1077 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 STXBP4Q6ZWJ1 553 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 HAUS6Q7Z4H7 955 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 TMEM40Q8WWA1 233 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 ERCC4Q92889 916 aaPredicted RBP15.01□□□□□ -0.01
VMP1-203ENST00000586245 TBC1D7Q9P0N9 293 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 ZMYND8Q9ULU4 1186 aaPredicted RBP15.01□□□□□ -0.01
VMP1-203ENST00000586245 PCDHA5Q9Y5H7 936 aa15.01□□□□□ -0.01
VMP1-203ENST00000586245 ADGRA3Q8IWK6 1321 aa15□□□□□ -0.01
VMP1-203ENST00000586245 DENND3A2RUS2 1198 aa15□□□□□ -0.01
VMP1-203ENST00000586245 ERLIN2O94905 339 aa15□□□□□ -0.01
VMP1-203ENST00000586245 RHOBTB3O94955 611 aa15□□□□□ -0.01
VMP1-203ENST00000586245 GCNT3O95395 438 aa15□□□□□ -0.01
VMP1-203ENST00000586245 ITGB8P26012 769 aa15□□□□□ -0.01
VMP1-203ENST00000586245 NMT1P30419 496 aaKnown RBP15□□□□□ -0.01
VMP1-203ENST00000586245 NCBP1Q09161 790 aaKnown RBP15□□□□□ -0.01
VMP1-203ENST00000586245 STRN3Q13033 797 aa15□□□□□ -0.01
VMP1-203ENST00000586245 PAK2Q13177 524 aa15□□□□□ -0.01
VMP1-203ENST00000586245 ALCAMQ13740 583 aa15□□□□□ -0.01
VMP1-203ENST00000586245 LPIN1Q14693 890 aa15□□□□□ -0.01
VMP1-203ENST00000586245 PCBP1Q15365 356 aaKnown RBP eCLIP15□□□□□ -0.01
VMP1-203ENST00000586245 CATSPER4Q7RTX7 472 aa15□□□□□ -0.01
VMP1-203ENST00000586245 ZNF720Q7Z2F6 126 aa15□□□□□ -0.01
VMP1-203ENST00000586245 TMEM161BQ8NDZ6 487 aa15□□□□□ -0.01
VMP1-203ENST00000586245 SPATA20Q8TB22 786 aa15□□□□□ -0.01
VMP1-203ENST00000586245 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
VMP1-203ENST00000586245 GTPBP4Q9BZE4 634 aaKnown RBP15□□□□□ -0.01
VMP1-203ENST00000586245 TMEM134Q9H6X4 195 aa15□□□□□ -0.01
VMP1-203ENST00000586245 PRMT7Q9NVM4 692 aaPredicted RBP15□□□□□ -0.01
VMP1-203ENST00000586245 KIAA1468Q9P260 1216 aa15□□□□□ -0.01
VMP1-203ENST00000586245 ARHGAP28Q9P2N2 729 aa15□□□□□ -0.01
VMP1-203ENST00000586245 NOC2LQ9Y3T9 749 aaKnown RBP15□□□□□ -0.01
VMP1-203ENST00000586245 PCDHB13Q9Y5F0 798 aa15□□□□□ -0.01
VMP1-203ENST00000586245 MYH11P35749 1972 aa15□□□□□ -0.01
VMP1-203ENST00000586245 NBNO60934 754 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 CSDE1O75534 798 aaKnown RBP14.99□□□□□ -0.01
VMP1-203ENST00000586245 PRKCBP05771 671 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 CSF2RAP15509 400 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 FGFR4P22455 802 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 CD52P31358 61 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 FPGSQ05932 587 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 MBTD1Q05BQ5 628 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 EHHADHQ08426 723 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 NFX1Q12986 1120 aaKnown RBP14.99□□□□□ -0.01
VMP1-203ENST00000586245 PPIGQ13427 754 aaKnown RBP eCLIP14.99□□□□□ -0.01
VMP1-203ENST00000586245 MBTPS1Q14703 1052 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 TMEM132AQ24JP5 1023 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 CAVIN1Q6NZI2 390 aaKnown RBP14.99□□□□□ -0.01
VMP1-203ENST00000586245 DEFB128Q7Z7B8 93 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 FAM228AQ86W67 206 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 RPUSD2Q8IZ73 545 aaKnown RBP14.99□□□□□ -0.01
VMP1-203ENST00000586245 SEPT8Q92599 483 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 BADQ92934 168 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 HPS3Q969F9 1004 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 FIZ1Q96SL8 496 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 IFIH1Q9BYX4 1025 aaKnown RBP14.99□□□□□ -0.01
VMP1-203ENST00000586245 ST6GALNAC4Q9H4F1 302 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 MINDY3Q9H8M7 445 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 SLC39A2Q9NP94 309 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 ST3GAL5Q9UNP4 418 aa14.99□□□□□ -0.01
VMP1-203ENST00000586245 TANC1Q9C0D5 1861 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 CXCL10P02778 98 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 PFKMP08237 780 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 MYBP10242 640 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 SARSP49591 514 aaKnown RBP14.98□□□□□ -0.01
VMP1-203ENST00000586245 GTF2BQ00403 316 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 FAM187BQ17R55 369 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 NT5DC1Q5TFE4 455 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 PPP4R3CPQ6ZMV5 832 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 HVCN1Q96D96 273 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 PRIMPOLQ96LW4 560 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 CCDC113Q9H0I3 377 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 FZD8Q9H461 694 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 AGO3Q9H9G7 860 aaKnown RBP14.98□□□□□ -0.01
VMP1-203ENST00000586245 ERVK-5Q9HDB9 667 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 MAN1B1Q9UKM7 699 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 PADI3Q9ULW8 664 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 TBX20Q9UMR3 447 aa14.98□□□□□ -0.01
VMP1-203ENST00000586245 ACKR2O00590 384 aa14.97□□□□□ -0.01
VMP1-203ENST00000586245 EIF3DO15371 548 aaKnown RBP eCLIP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms