RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 FERMT3Q86UX7 667 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 GJD3Q8N144 294 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 HELQQ8TDG4 1101 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 PRPF31Q8WWY3 499 aaKnown RBP20.83■□□□□ 0.93
ATG4D-203ENST00000585752 RSPH1Q8WYR4 309 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 PGBD4Q96DM1 585 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 CWH43Q9H720 699 aa20.83■□□□□ 0.93
ATG4D-203ENST00000585752 OR52Z1P0C646 297 aa20.82■□□□□ 0.92
ATG4D-203ENST00000585752 DNAJB1P25685 340 aa20.82■□□□□ 0.92
ATG4D-203ENST00000585752 CA8P35219 290 aa20.82■□□□□ 0.92
ATG4D-203ENST00000585752 PHKA2P46019 1235 aa20.82■□□□□ 0.92
ATG4D-203ENST00000585752 ALDH7A1P49419 539 aaKnown RBP20.82■□□□□ 0.92
ATG4D-203ENST00000585752 TFDP1Q14186 410 aa20.82■□□□□ 0.92
ATG4D-203ENST00000585752 KCNT2Q6UVM3 1135 aa20.82■□□□□ 0.92
ATG4D-203ENST00000585752 ERMNQ8TAM6 284 aa20.82■□□□□ 0.92
ATG4D-203ENST00000585752 MRPS27Q92552 414 aaKnown RBP20.82■□□□□ 0.92
ATG4D-203ENST00000585752 DHX33Q9H6R0 707 aaKnown RBP20.82■□□□□ 0.92
ATG4D-203ENST00000585752 ENTPD7Q9NQZ7 604 aa20.82■□□□□ 0.92
ATG4D-203ENST00000585752 DAXXQ9UER7 740 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-203ENST00000585752 CD207Q9UJ71 328 aa20.82■□□□□ 0.92
ATG4D-203ENST00000585752 CARNS1A5YM72 827 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 ERLIN2O94905 339 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 SLITRK3O94933 977 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 IRS1P35568 1242 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 RNASELQ05823 741 aaKnown RBP20.81■□□□□ 0.92
ATG4D-203ENST00000585752 LAMTOR4Q0VGL1 99 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 ADAM15Q13444 863 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 CAMK1Q14012 370 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 MXD4Q14582 209 aaPredicted RBP20.81■□□□□ 0.92
ATG4D-203ENST00000585752 FAM178BQ8IXR5 827 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 ZNF579Q8NAF0 562 aaKnown RBP20.81■□□□□ 0.92
ATG4D-203ENST00000585752 TMEM87AQ8NBN3 555 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 ANKEF1Q9NU02 776 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 FAM105AQ9NUU6 356 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 SPG21Q9NZD8 308 aa20.81■□□□□ 0.92
ATG4D-203ENST00000585752 WRAP73Q9P2S5 460 aaPredicted RBP20.81■□□□□ 0.92
ATG4D-203ENST00000585752 XIRP2A4UGR9 3374 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 WNT7AO00755 349 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 DGAT1O75907 488 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 GTF2F1P35269 517 aaKnown RBP eCLIP20.8■□□□□ 0.92
ATG4D-203ENST00000585752 PLCB3Q01970 1234 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 SPIRE1Q08AE8 756 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 NBR1Q14596 966 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 CTC1Q2NKJ3 1217 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 GLB1LQ6UWU2 654 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 TMC7Q7Z402 723 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 ADGRD2Q7Z7M1 963 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 EFHBQ8N7U6 833 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 RNF149Q8NC42 400 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 URGCPQ8TCY9 931 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 CDCA3Q99618 268 aaPredicted RBP20.8■□□□□ 0.92
ATG4D-203ENST00000585752 HCSTQ9UBK5 93 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 PRKAG3Q9UGI9 489 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 LZTS1Q9Y250 596 aa20.8■□□□□ 0.92
ATG4D-203ENST00000585752 LAD1O00515 517 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 COL19A1Q14993 1142 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 LONRF3Q496Y0 759 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 CLLU1OSQ5K130 101 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 PLPP4Q5VZY2 271 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 LRRC55Q6ZSA7 311 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 FAM193BQ96PV7 902 aaPredicted RBP20.79■□□□□ 0.92
ATG4D-203ENST00000585752 POP1Q99575 1024 aaKnown RBP20.79■□□□□ 0.92
ATG4D-203ENST00000585752 TCF25Q9BQ70 676 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 TRAIPQ9BWF2 469 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 RAB34Q9BZG1 259 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 ZSCAN16Q9H4T2 348 aaPredicted RBP20.79■□□□□ 0.92
ATG4D-203ENST00000585752 INPP5FQ9Y2H2 1132 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 PCDHB6Q9Y5E3 794 aa20.79■□□□□ 0.92
ATG4D-203ENST00000585752 LINC01565O15544 149 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 LYPLA2O95372 231 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 LTBRP36941 435 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 ANP32AP39687 249 aaKnown RBP20.78■□□□□ 0.92
ATG4D-203ENST00000585752 TECP42680 631 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 TOB1P50616 345 aaPredicted RBP20.78■□□□□ 0.92
ATG4D-203ENST00000585752 PTGDRQ13258 359 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 SMAD4Q13485 552 aaKnown RBP20.78■□□□□ 0.92
ATG4D-203ENST00000585752 PCBP1Q15365 356 aaKnown RBP eCLIP20.78■□□□□ 0.92
ATG4D-203ENST00000585752 ZNF598Q86UK7 904 aaKnown RBP20.78■□□□□ 0.92
ATG4D-203ENST00000585752 LPPQ93052 612 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 TMEM169Q96HH4 297 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 MTMR9Q96QG7 549 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 HSD17B14Q9BPX1 270 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 TMEM60Q9H2L4 133 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 IFT122Q9HBG6 1241 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 NGRNQ9NPE2 291 aaKnown RBP20.78■□□□□ 0.92
ATG4D-203ENST00000585752 AGPAT5Q9NUQ2 364 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 RNF19AQ9NV58 838 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 MTMR6Q9Y217 621 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 NCOR1O75376 2440 aa20.78■□□□□ 0.92
ATG4D-203ENST00000585752 SPTBN5Q9NRC6 3674 aaKnown RBP20.77■□□□□ 0.92
ATG4D-203ENST00000585752 POTEMA6NI47 508 aa20.77■□□□□ 0.92
ATG4D-203ENST00000585752 INO80B-WBP1J3KQ70 363 aa20.77■□□□□ 0.92
ATG4D-203ENST00000585752 PER2O15055 1255 aa20.77■□□□□ 0.92
ATG4D-203ENST00000585752 ZBTB39O15060 712 aa20.77■□□□□ 0.92
ATG4D-203ENST00000585752 MBTPS2O43462 519 aa20.77■□□□□ 0.92
ATG4D-203ENST00000585752 ZC3H11AO75152 810 aaKnown RBP eCLIP20.77■□□□□ 0.92
ATG4D-203ENST00000585752 BMP15O95972 392 aa20.77■□□□□ 0.92
ATG4D-203ENST00000585752 XRCC6P12956 609 aaKnown RBP eCLIP20.77■□□□□ 0.92
ATG4D-203ENST00000585752 ERVFC1P60507 584 aa20.77■□□□□ 0.92
ATG4D-203ENST00000585752 DLX2Q07687 328 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms