RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 HOXA11P31270 313 aaPredicted RBP26.23■■□□□ 1.79
NDEL1-219ENST00000585098 MBTD1Q05BQ5 628 aa26.23■■□□□ 1.79
NDEL1-219ENST00000585098 PCBP1Q15365 356 aaKnown RBP eCLIP26.23■■□□□ 1.79
NDEL1-219ENST00000585098 CABP7Q86V35 215 aa26.23■■□□□ 1.79
NDEL1-219ENST00000585098 ABI1Q8IZP0 508 aa26.23■■□□□ 1.79
NDEL1-219ENST00000585098 CDK5RAP3Q96JB5 506 aa26.23■■□□□ 1.79
NDEL1-219ENST00000585098 TMEM117Q9H0C3 514 aa26.23■■□□□ 1.79
NDEL1-219ENST00000585098 POLD4Q9HCU8 107 aa26.23■■□□□ 1.79
NDEL1-219ENST00000585098 FAM105AQ9NUU6 356 aa26.23■■□□□ 1.79
NDEL1-219ENST00000585098 TSPAN1O60635 241 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 SKIP12755 728 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 CEBPZQ03701 1054 aaKnown RBP26.22■■□□□ 1.79
NDEL1-219ENST00000585098 GRIN1Q05586 938 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 PTPAQ15257 358 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 CLLU1OSQ5K130 101 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 SPRYD3Q8NCJ5 442 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 BSNDQ8WZ55 320 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 CASD1Q96PB1 797 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 C11orf84Q9BUA3 381 aaPredicted RBP26.22■■□□□ 1.79
NDEL1-219ENST00000585098 PLVAPQ9BX97 442 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 NT5C3AQ9H0P0 336 aa26.22■■□□□ 1.79
NDEL1-219ENST00000585098 LONP1P36776 959 aaKnown RBP26.21■■□□□ 1.79
NDEL1-219ENST00000585098 UBA7P41226 1012 aa26.21■■□□□ 1.79
NDEL1-219ENST00000585098 RAB27AP51159 221 aa26.21■■□□□ 1.79
NDEL1-219ENST00000585098 NCBP1Q09161 790 aaKnown RBP26.21■■□□□ 1.79
NDEL1-219ENST00000585098 LONRF3Q496Y0 759 aa26.21■■□□□ 1.79
NDEL1-219ENST00000585098 SPOUT1Q5T280 376 aaKnown RBP26.21■■□□□ 1.79
NDEL1-219ENST00000585098 TYW1Q9NV66 732 aaKnown RBP26.21■■□□□ 1.79
NDEL1-219ENST00000585098 HCSTQ9UBK5 93 aa26.21■■□□□ 1.79
NDEL1-219ENST00000585098 ZNF623O75123 536 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 AXLP30530 894 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 AMHR2Q16671 573 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 PTPROQ16827 1216 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.2■■□□□ 1.78
NDEL1-219ENST00000585098 KCTD17Q8N5Z5 321 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 HELQQ8TDG4 1101 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 KIFAP3Q92845 792 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 LPPQ93052 612 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 MRPL38Q96DV4 380 aaKnown RBP26.2■■□□□ 1.78
NDEL1-219ENST00000585098 CPB2Q96IY4 423 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 PCDHB2Q9Y5E7 798 aa26.2■■□□□ 1.78
NDEL1-219ENST00000585098 RALGAPA2Q2PPJ7 1873 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 PRUNE2Q8WUY3 3088 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 SLC26A4O43511 780 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 SSBP05455 408 aaKnown RBP eCLIP26.19■■□□□ 1.78
NDEL1-219ENST00000585098 MARCKSP29966 332 aaPredicted RBP26.19■■□□□ 1.78
NDEL1-219ENST00000585098 NAMPTP43490 491 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 PPP2R5AQ15172 486 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 TMEM119Q4V9L6 283 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 UBXN11Q5T124 520 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 CDCA2Q69YH5 1023 aaPredicted RBP26.19■■□□□ 1.78
NDEL1-219ENST00000585098 RINT1Q6NUQ1 792 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 NOTUMQ6P988 496 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 ZBTB8OSQ8IWT0 167 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 CALML4Q96GE6 196 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 IFT74Q96LB3 600 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 USP28Q96RU2 1077 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 RUSC1Q9BVN2 902 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 PRDM6Q9NQX0 595 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 NLRC5Q86WI3 1866 aa26.19■■□□□ 1.78
NDEL1-219ENST00000585098 PRRC2BQ5JSZ5 2229 aaKnown RBP26.18■■□□□ 1.78
NDEL1-219ENST00000585098 GRM6O15303 877 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 B4GALT5O43286 388 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 SKIV2LQ15477 1246 aaKnown RBP26.18■■□□□ 1.78
NDEL1-219ENST00000585098 FOXD4L5Q5VV16 416 aaPredicted RBP26.18■■□□□ 1.78
NDEL1-219ENST00000585098 LRRC55Q6ZSA7 311 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 LRRC43Q8N309 656 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 KLHL23Q8NBE8 558 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 DEPTORQ8TB45 409 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 FOXD4L4Q8WXT5 416 aaPredicted RBP26.18■■□□□ 1.78
NDEL1-219ENST00000585098 P2RX5Q93086 422 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 PGBD4Q96DM1 585 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 C2orf40Q9H1Z8 148 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 CWH43Q9H720 699 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 AAASQ9NRG9 546 aa26.18■■□□□ 1.78
NDEL1-219ENST00000585098 FNDC1Q4ZHG4 1894 aaPredicted RBP26.17■■□□□ 1.78
NDEL1-219ENST00000585098 MEIS3P2A8K0S8 358 aa26.17■■□□□ 1.78
NDEL1-219ENST00000585098 PDIA4P13667 645 aaKnown RBP26.17■■□□□ 1.78
NDEL1-219ENST00000585098 ARF4P18085 180 aaPredicted RBP26.17■■□□□ 1.78
NDEL1-219ENST00000585098 NAALADL2Q58DX5 795 aa26.17■■□□□ 1.78
NDEL1-219ENST00000585098 C1orf186Q6ZWK4 172 aa26.17■■□□□ 1.78
NDEL1-219ENST00000585098 SYT2Q8N9I0 419 aaPredicted RBP26.17■■□□□ 1.78
NDEL1-219ENST00000585098 CCDC51Q96ER9 411 aa26.17■■□□□ 1.78
NDEL1-219ENST00000585098 CSRNP2Q9H175 543 aa26.17■■□□□ 1.78
NDEL1-219ENST00000585098 ALG13Q9NP73 1137 aaKnown RBP26.17■■□□□ 1.78
NDEL1-219ENST00000585098 PRMT7Q9NVM4 692 aaPredicted RBP26.17■■□□□ 1.78
NDEL1-219ENST00000585098 FBXO2Q9UK22 296 aaPredicted RBP26.17■■□□□ 1.78
NDEL1-219ENST00000585098 PLAGL2Q9UPG8 496 aa26.17■■□□□ 1.78
NDEL1-219ENST00000585098 PCDHB12Q9Y5F1 795 aa26.17■■□□□ 1.78
NDEL1-219ENST00000585098 SRPRBQ9Y5M8 271 aaKnown RBP26.17■■□□□ 1.78
NDEL1-219ENST00000585098 HIP1RO75146 1068 aa26.16■■□□□ 1.78
NDEL1-219ENST00000585098 PLA2G4BP0C869 781 aa26.16■■□□□ 1.78
NDEL1-219ENST00000585098 SLC12A3P55017 1021 aa26.16■■□□□ 1.78
NDEL1-219ENST00000585098 MRPL10Q7Z7H8 261 aaKnown RBP26.16■■□□□ 1.78
NDEL1-219ENST00000585098 DAW1Q8N136 415 aa26.16■■□□□ 1.78
NDEL1-219ENST00000585098 COLGALT1Q8NBJ5 622 aa26.16■■□□□ 1.78
NDEL1-219ENST00000585098 RASSF8Q8NHQ8 419 aa26.16■■□□□ 1.78
NDEL1-219ENST00000585098 KIFC3Q9BVG8 833 aa26.16■■□□□ 1.78
NDEL1-219ENST00000585098 EIF2AQ9BY44 585 aaKnown RBP26.16■■□□□ 1.78
NDEL1-219ENST00000585098 FZD8Q9H461 694 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms