RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 POTEGQ6S5H5 508 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 MAEAQ7L5Y9 396 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 C4orf32Q8N8J7 132 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 TCP11Q8WWU5 503 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 GPRC5CQ9NQ84 441 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 AAASQ9NRG9 546 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 FAM105AQ9NUU6 356 aa20.07■□□□□ 0.8
SRSF1-208ENST00000584773 NT5C1B-RDH14C9J2C7 533 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 EOMESO95936 686 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 HOXA11P31270 313 aaPredicted RBP20.06■□□□□ 0.8
SRSF1-208ENST00000584773 NRIP1P48552 1158 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 RBM10P98175 930 aaKnown RBP20.06■□□□□ 0.8
SRSF1-208ENST00000584773 CAPSQ13938 189 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 UBXN11Q5T124 520 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 KCNT2Q6UVM3 1135 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 SRGAP1Q7Z6B7 1085 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 EXOC8Q8IYI6 725 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 KHSRPQ92945 711 aaKnown RBP eCLIP20.06■□□□□ 0.81e-17■■■□□ 15.3
SRSF1-208ENST00000584773 TBC1D32Q96NH3 1257 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 INPP5FQ9Y2H2 1132 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 PCDHB6Q9Y5E3 794 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 C5orf42Q9H799 3197 aa20.06■□□□□ 0.8
SRSF1-208ENST00000584773 GRXCR2A6NFK2 248 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 PER2O15055 1255 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 GAS2O43903 313 aaKnown RBP20.05■□□□□ 0.8
SRSF1-208ENST00000584773 GLRA2P23416 452 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 U2AF2P26368 475 aaKnown RBP eCLIP20.05■□□□□ 0.87e-14■■■□□ 15.6
SRSF1-208ENST00000584773 ECM1Q16610 540 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 MICAL1Q8TDZ2 1067 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 CPB2Q96IY4 423 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 CCDC43Q96MW1 224 aaKnown RBP20.05■□□□□ 0.8
SRSF1-208ENST00000584773 ZNF558Q96NG5 402 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 TRAIPQ9BWF2 469 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 POLR3FQ9H1D9 316 aaPredicted RBP20.05■□□□□ 0.8
SRSF1-208ENST00000584773 UPF2Q9HAU5 1272 aaKnown RBP20.05■□□□□ 0.8
SRSF1-208ENST00000584773 TUFT1Q9NNX1 390 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 TLR9Q9NR96 1032 aa20.05■□□□□ 0.8
SRSF1-208ENST00000584773 B4GALT3O60512 393 aa20.04■□□□□ 0.8
SRSF1-208ENST00000584773 DGAT1O75907 488 aa20.04■□□□□ 0.8
SRSF1-208ENST00000584773 ARL2P36404 184 aa20.04■□□□□ 0.8
SRSF1-208ENST00000584773 AFF1P51825 1210 aaKnown RBP20.04■□□□□ 0.8
SRSF1-208ENST00000584773 PLPP4Q5VZY2 271 aa20.04■□□□□ 0.8
SRSF1-208ENST00000584773 NOL7Q9UMY1 257 aaKnown RBP20.04■□□□□ 0.8
SRSF1-208ENST00000584773 PCDHB2Q9Y5E7 798 aa20.04■□□□□ 0.8
SRSF1-208ENST00000584773 FSCN2O14926 492 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 ASAP2O43150 1006 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 TSPAN1O60635 241 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 OFD1O75665 1012 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 GLP2RO95838 553 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 GJB2P29033 226 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 PTENP60484 403 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 UBE3AQ05086 875 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 MBTD1Q05BQ5 628 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 ORC2Q13416 577 aaPredicted RBP20.03■□□□□ 0.8
SRSF1-208ENST00000584773 ADAM15Q13444 863 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 AGMOQ6ZNB7 445 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 TMEM173Q86WV6 379 aaPredicted RBP20.03■□□□□ 0.8
SRSF1-208ENST00000584773 SLC39A11Q8N1S5 342 aa20.03■□□□□ 0.8
SRSF1-208ENST00000584773 MRPS27Q92552 414 aaKnown RBP20.03■□□□□ 0.8
SRSF1-208ENST00000584773 POLR3CQ9BUI4 534 aaPredicted RBP20.03■□□□□ 0.8
SRSF1-208ENST00000584773 EIF2AQ9BY44 585 aaKnown RBP20.03■□□□□ 0.8
SRSF1-208ENST00000584773 INO80B-WBP1J3KQ70 363 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 B4GALT5O43286 388 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 ZC3H11AO75152 810 aaKnown RBP eCLIP20.02■□□□□ 0.8
SRSF1-208ENST00000584773 TRAPPC10P48553 1259 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 NDUFV1P49821 464 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 BCAR1P56945 870 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 PLCB3Q01970 1234 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 PTGDRQ13258 359 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 MXD4Q14582 209 aaPredicted RBP20.02■□□□□ 0.8
SRSF1-208ENST00000584773 AMHR2Q16671 573 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 MCTP1Q6DN14 999 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 FAM178BQ8IXR5 827 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 VN1R2Q8NFZ6 395 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 BCL7CQ8WUZ0 217 aaPredicted RBP20.02■□□□□ 0.8
SRSF1-208ENST00000584773 TCF25Q9BQ70 676 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 GBP3Q9H0R5 595 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 NRDE2Q9H7Z3 1164 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 POLD4Q9HCU8 107 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 TBC1D13Q9NVG8 400 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 CLEC1BQ9P126 229 aa20.02■□□□□ 0.8
SRSF1-208ENST00000584773 BARX2Q9UMQ3 279 aaPredicted RBP20.02■□□□□ 0.8
SRSF1-208ENST00000584773 PP2D1A8MPX8 630 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 HIDE1A8MVS5 230 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 NCK2O43639 380 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 ZNF623O75123 536 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 ERLIN2O94905 339 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 RPA1P27694 616 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 RAB27AP51159 221 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 TFDP1Q14186 410 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 IL17AQ16552 155 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 CSPP1Q1MSJ5 1256 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 NOMO2Q5JPE7 1267 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 GLB1LQ6UWU2 654 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 CDR2LQ86X02 465 aaPredicted RBP20.02■□□□□ 0.79
SRSF1-208ENST00000584773 EFHBQ8N7U6 833 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 SMG8Q8ND04 991 aaKnown RBP20.02■□□□□ 0.79
SRSF1-208ENST00000584773 BSNDQ8WZ55 320 aa20.02■□□□□ 0.79
SRSF1-208ENST00000584773 MRPL9Q9BYD2 267 aaKnown RBP20.02■□□□□ 0.79
SRSF1-208ENST00000584773 TLE6Q9H808 572 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms