RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ADAMTS10Q9H324 1103 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 ST6GALNAC4Q9H4F1 302 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 ALPK3Q96L96 1907 aa20.17■□□□□ 0.82
RFFL-211ENST00000584541 TANC1Q9C0D5 1861 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 BRCA2P51587 3418 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 SYCE3A1L190 88 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 DENND3A2RUS2 1198 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 K7ERI5 159 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 PITPNM1O00562 1244 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 EIF3DO15371 548 aaKnown RBP eCLIP20.16■□□□□ 0.82
RFFL-211ENST00000584541 PPP1R2P41236 205 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 NLRP12P59046 1061 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 STRN3Q13033 797 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 STK4Q13043 487 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 FAM26DQ5JW98 314 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 CDCA2Q69YH5 1023 aaPredicted RBP20.16■□□□□ 0.82
RFFL-211ENST00000584541 IFNLR1Q8IU57 520 aaPredicted RBP20.16■□□□□ 0.82
RFFL-211ENST00000584541 TMEM161BQ8NDZ6 487 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 FIZ1Q96SL8 496 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 OSMRQ99650 979 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 ANP32EQ9BTT0 268 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 TMEM134Q9H6X4 195 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 IFT122Q9HBG6 1241 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 TMEM39AQ9NV64 488 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 ARHGAP28Q9P2N2 729 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 GDAQ9Y2T3 454 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 UBE4BO95155 1302 aa20.16■□□□□ 0.82
RFFL-211ENST00000584541 INO80B-WBP1J3KQ70 363 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 CCDC192P0DO97 292 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 MYBP10242 640 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 SELPP16109 830 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 GTF2BQ00403 316 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 STX1AQ16623 288 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 MAPK6Q16659 721 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 ZNF618Q5T7W0 954 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 MYOCDQ8IZQ8 938 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 KIAA0895Q8NCT3 520 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 GZF1Q9H116 711 aaPredicted RBP20.15■□□□□ 0.82
RFFL-211ENST00000584541 HIPK3Q9H422 1215 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 DACH1Q9UI36 760 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 EXOC7Q9UPT5 735 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 ADGRA3Q8IWK6 1321 aa20.15■□□□□ 0.82
RFFL-211ENST00000584541 CHRNA1P02708 482 aa20.14■□□□□ 0.81
RFFL-211ENST00000584541 DARSP14868 501 aaKnown RBP20.14■□□□□ 0.81
RFFL-211ENST00000584541 EIF4BP23588 611 aaKnown RBP20.14■□□□□ 0.81
RFFL-211ENST00000584541 MGAT3Q09327 533 aa20.14■□□□□ 0.81
RFFL-211ENST00000584541 PCBP1Q15365 356 aaKnown RBP eCLIP20.14■□□□□ 0.81
RFFL-211ENST00000584541 ZC2HC1CQ53FD0 456 aaPredicted RBP20.14■□□□□ 0.81
RFFL-211ENST00000584541 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.81
RFFL-211ENST00000584541 LRRC8DQ7L1W4 858 aa20.14■□□□□ 0.81
RFFL-211ENST00000584541 MLKLQ8NB16 471 aa20.14■□□□□ 0.81
RFFL-211ENST00000584541 KCNN1Q92952 543 aa20.14■□□□□ 0.81
RFFL-211ENST00000584541 ACCSQ96QU6 501 aa20.14■□□□□ 0.81
RFFL-211ENST00000584541 NOC4LQ9BVI4 516 aaKnown RBP20.14■□□□□ 0.81
RFFL-211ENST00000584541 PRMT7Q9NVM4 692 aaPredicted RBP20.14■□□□□ 0.81
RFFL-211ENST00000584541 ANO10Q9NW15 660 aa20.14■□□□□ 0.81
RFFL-211ENST00000584541 TBX20Q9UMR3 447 aa20.14■□□□□ 0.81
RFFL-211ENST00000584541 ERLIN2O94905 339 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 PRPF6O94906 941 aaKnown RBP20.13■□□□□ 0.81
RFFL-211ENST00000584541 SFPQP23246 707 aaKnown RBP eCLIP20.13■□□□□ 0.81
RFFL-211ENST00000584541 CASP5P51878 434 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 TYRO3Q06418 890 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 NCBP1Q09161 790 aaKnown RBP20.13■□□□□ 0.81
RFFL-211ENST00000584541 COBLL1Q53SF7 1204 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 EPM2AIP1Q7L775 607 aaPredicted RBP20.13■□□□□ 0.81
RFFL-211ENST00000584541 SMYD4Q8IYR2 804 aaPredicted RBP20.13■□□□□ 0.81
RFFL-211ENST00000584541 SYCP3Q8IZU3 236 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 GUF1Q8N442 669 aaKnown RBP20.13■□□□□ 0.81
RFFL-211ENST00000584541 USP38Q8NB14 1042 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 ZNF507Q8TCN5 953 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 FGFBP2Q9BYJ0 223 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 TMEM206Q9H813 350 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 CDHR5Q9HBB8 845 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 PRDM5Q9NQX1 630 aaPredicted RBP20.13■□□□□ 0.81
RFFL-211ENST00000584541 PRKAG2Q9UGJ0 569 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 TBX21Q9UL17 535 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 SQORQ9Y6N5 450 aa20.13■□□□□ 0.81
RFFL-211ENST00000584541 PPP1R37O75864 691 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 PARNO95453 639 aaKnown RBP20.12■□□□□ 0.81
RFFL-211ENST00000584541 PRKCBP05771 671 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 PRCPP42785 496 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 MBTD1Q05BQ5 628 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 TMEM132AQ24JP5 1023 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 GLIS3Q8NEA6 775 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 SCFD1Q8WVM8 642 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 BICD1Q96G01 975 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 PRIMPOLQ96LW4 560 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 STRA6Q9BX79 667 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 PPP1R12CQ9BZL4 782 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 CCDC113Q9H0I3 377 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 MAPK8IP1Q9UQF2 711 aa20.12■□□□□ 0.81
RFFL-211ENST00000584541 PSMA7O14818 248 aa20.11■□□□□ 0.81
RFFL-211ENST00000584541 RPS6KA5O75582 802 aa20.11■□□□□ 0.81
RFFL-211ENST00000584541 BMP6P22004 513 aa20.11■□□□□ 0.81
RFFL-211ENST00000584541 FAM187BQ17R55 369 aa20.11■□□□□ 0.81
RFFL-211ENST00000584541 BMT2Q1RMZ1 405 aa20.11■□□□□ 0.81
RFFL-211ENST00000584541 PPP4R3CPQ6ZMV5 832 aa20.11■□□□□ 0.81
RFFL-211ENST00000584541 CATSPER4Q7RTX7 472 aa20.11■□□□□ 0.81
RFFL-211ENST00000584541 MAP4K3Q8IVH8 894 aa20.11■□□□□ 0.81
RFFL-211ENST00000584541 NELFCDQ8IXH7 590 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms