RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PEX3P56589 373 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 MRPS35P82673 323 aaKnown RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 ZBTB33Q86T24 672 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 APLFQ8IW19 511 aaPredicted RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 RNPC3Q96LT9 517 aaKnown RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 HNRNPCL2B2RXH8 293 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 NPR1P16066 1061 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 IL10P22301 178 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 PPP6R3Q5H9R7 873 aaPredicted RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 CC2D2BQ6DHV5 1058 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 TMCO5AQ8N6Q1 288 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 MCPH1Q8NEM0 835 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 CCDC90BQ9GZT6 254 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 INTS2Q9H0H0 1204 aaKnown RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 TRIM66O15016 1216 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 CDH16O75309 829 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 DEAF1O75398 565 aaPredicted RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 CDK8P49336 464 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 CDO1Q16878 200 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 KIAA1755Q5JYT7 1200 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 SCARA5Q6ZMJ2 495 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 NLRP10Q86W26 655 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 TBC1D10CQ8IV04 446 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 PRPF38AQ8NAV1 312 aaKnown RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 AMACRQ9UHK6 382 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 PAIP2BQ9ULR5 123 aaKnown RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 SSU72P8A0A1W2PR75 194 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 USP17L3A6NCW0 530 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 USP17L4A6NCW7 530 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 USP17L1Q7RTZ2 530 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 FLAD1Q8NFF5 587 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 TTC8Q8TAM2 541 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 THAP11Q96EK4 314 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 DYNLL2Q96FJ2 89 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 DACH2Q96NX9 599 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 XPO6Q96QU8 1125 aaKnown RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 PRMT1Q99873 361 aaKnown RBP13.87□□□□□ -0.19
RNF43-208ENST00000584437 CYP4F11Q9HBI6 524 aa13.87□□□□□ -0.19
RNF43-208ENST00000584437 GOLGA8MH3BSY2 632 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 KDM1AO60341 852 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 CORO7P57737 925 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 ALX1Q15699 326 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 SPDYE1Q8NFV5 336 aaPredicted RBP13.86□□□□□ -0.19
RNF43-208ENST00000584437 HNRNPLLQ8WVV9 542 aaKnown RBP13.86□□□□□ -0.19
RNF43-208ENST00000584437 RNF25Q96BH1 459 aaPredicted RBP13.86□□□□□ -0.19
RNF43-208ENST00000584437 ALKBH8Q96BT7 664 aaKnown RBP13.86□□□□□ -0.19
RNF43-208ENST00000584437 MAGEB5Q9BZ81 275 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 PI4KBQ9UBF8 816 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 H7C1W4 665 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 LSP1P33241 339 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 GCLMP48507 274 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 MTF1Q14872 753 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 DDX17Q92841 729 aaKnown RBP13.86□□□□□ -0.19
RNF43-208ENST00000584437 SEC16BQ96JE7 1060 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 C11orf70Q9BRQ4 267 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 TRABDQ9H4I3 376 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 CYP2D7A0A087X1C5 515 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 CCDC195A0A1B0GUA6 201 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 CNGA3Q16281 694 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 ATL2Q8NHH9 583 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 EXT2Q93063 718 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 RANBP17Q9H2T7 1088 aaKnown RBP13.86□□□□□ -0.19
RNF43-208ENST00000584437 ZNF408Q9H9D4 720 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 LY9Q9HBG7 655 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 POTEMA6NI47 508 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 CHN1P15882 459 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 FRMD5Q7Z6J6 570 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 CDKL3Q8IVW4 592 aaPredicted RBP13.86□□□□□ -0.19
RNF43-208ENST00000584437 CCNYL1Q8N7R7 359 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 DCAF4Q8WV16 495 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 NAF1Q96HR8 494 aaKnown RBP13.86□□□□□ -0.19
RNF43-208ENST00000584437 ASPSCR1Q9BZE9 553 aa13.86□□□□□ -0.19
RNF43-208ENST00000584437 ATP2C1P98194 919 aaPredicted RBP13.85□□□□□ -0.19
RNF43-208ENST00000584437 MECOMQ03112 1051 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 TAP1Q03518 808 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 KRT17Q04695 432 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 TEX12Q9BXU0 123 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 SEC31BQ9NQW1 1179 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 PIK3R2O00459 728 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 SNX2O60749 519 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 SLC1A1P43005 524 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 VAMP7P51809 220 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 PRELPP51888 382 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 PDXDC2PQ6P474 469 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 CYB5R4Q7L1T6 521 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 TRPM8Q7Z2W7 1104 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 OXER1Q8TDS5 423 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 CNKSR1Q969H4 720 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 CHCHD3Q9NX63 227 aaKnown RBP13.85□□□□□ -0.19
RNF43-208ENST00000584437 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.85□□□□□ -0.19
RNF43-208ENST00000584437 NEDD4P46934 1319 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 DAB1O75553 588 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 SLC4A1P02730 911 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 MCAMP43121 646 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 CRKLP46109 303 aaKnown RBP13.85□□□□□ -0.19
RNF43-208ENST00000584437 IRAK1P51617 712 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 GADL1Q6ZQY3 521 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 PBXIP1Q96AQ6 731 aa13.85□□□□□ -0.19
RNF43-208ENST00000584437 FOXP3Q9BZS1 431 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms