RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 CLLU1OSQ5K130 101 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 TWF2Q6IBS0 349 aaKnown RBP27.57■■■□□ 2
TTC39C-209ENST00000584250 FAM43BQ6ZT52 329 aaPredicted RBP27.57■■■□□ 2
TTC39C-209ENST00000584250 MICALL1Q8N3F8 863 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 CLP1Q92989 425 aaKnown RBP27.57■■■□□ 2
TTC39C-209ENST00000584250 LPPQ93052 612 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 ZSCAN16Q9H4T2 348 aaPredicted RBP27.57■■■□□ 2
TTC39C-209ENST00000584250 CHST12Q9NRB3 414 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 FBXO2Q9UK22 296 aaPredicted RBP27.57■■■□□ 2
TTC39C-209ENST00000584250 RALGAPA2Q2PPJ7 1873 aa27.57■■■□□ 2
TTC39C-209ENST00000584250 LRRIQ4A6NIV6 560 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 B4GALT5O43286 388 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 TSPAN1O60635 241 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 CTNNB1P35222 781 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 UBXN11Q5T124 520 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 DAW1Q8N136 415 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 CPB2Q96IY4 423 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 CLIC6Q96NY7 704 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 CSRNP2Q9H175 543 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 PRDM6Q9NQX0 595 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 PRUNE2Q8WUY3 3088 aa27.56■■■□□ 2
TTC39C-209ENST00000584250 BMPR1AP36894 532 aa27.55■■■□□ 2
TTC39C-209ENST00000584250 POU5F1BQ06416 359 aa27.55■■■□□ 2
TTC39C-209ENST00000584250 FOXD4L6Q3SYB3 417 aaPredicted RBP27.55■■■□□ 2
TTC39C-209ENST00000584250 RINT1Q6NUQ1 792 aa27.55■■■□□ 2
TTC39C-209ENST00000584250 FOXD4L3Q6VB84 417 aaPredicted RBP27.55■■■□□ 2
TTC39C-209ENST00000584250 CASD1Q96PB1 797 aa27.55■■■□□ 2
TTC39C-209ENST00000584250 KIFC3Q9BVG8 833 aa27.55■■■□□ 2
TTC39C-209ENST00000584250 FAM105AQ9NUU6 356 aa27.55■■■□□ 2
TTC39C-209ENST00000584250 DACT1Q9NYF0 836 aa27.55■■■□□ 2
TTC39C-209ENST00000584250 TFIP11Q9UBB9 837 aaKnown RBP27.55■■■□□ 2
TTC39C-209ENST00000584250 USP20Q9Y2K6 914 aa27.55■■■□□ 2
TTC39C-209ENST00000584250 TTLL13PA6NNM8 815 aa27.54■■■□□ 2
TTC39C-209ENST00000584250 POU3F3P20264 500 aaPredicted RBP27.54■■■□□ 2
TTC39C-209ENST00000584250 MAPK7Q13164 816 aa27.54■■■□□ 2
TTC39C-209ENST00000584250 KARSQ15046 597 aaKnown RBP27.54■■■□□ 2
TTC39C-209ENST00000584250 LRRC55Q6ZSA7 311 aa27.54■■■□□ 2
TTC39C-209ENST00000584250 C1orf186Q6ZWK4 172 aa27.54■■■□□ 2
TTC39C-209ENST00000584250 CDR2LQ86X02 465 aaPredicted RBP27.54■■■□□ 2
TTC39C-209ENST00000584250 EPSTI1Q96J88 318 aa27.54■■■□□ 2
TTC39C-209ENST00000584250 AK8Q96MA6 479 aa27.54■■■□□ 2
TTC39C-209ENST00000584250 REV3LO60673 3130 aa27.54■■■□□ 2
TTC39C-209ENST00000584250 MYO7AQ13402 2215 aa27.53■■■□□ 2
TTC39C-209ENST00000584250 EDN1P05305 212 aa27.53■■■□□ 2
TTC39C-209ENST00000584250 SSBP05455 408 aaKnown RBP eCLIP27.53■■■□□ 2
TTC39C-209ENST00000584250 ZSCAN22P10073 491 aaPredicted RBP27.53■■■□□ 2
TTC39C-209ENST00000584250 LONP1P36776 959 aaKnown RBP27.53■■■□□ 2
TTC39C-209ENST00000584250 UBA7P41226 1012 aa27.53■■■□□ 2
TTC39C-209ENST00000584250 RAD51AP2Q09MP3 1159 aa27.53■■■□□ 2
TTC39C-209ENST00000584250 GPM6BQ13491 265 aa27.53■■■□□ 2
TTC39C-209ENST00000584250 HELQQ8TDG4 1101 aa27.53■■■□□ 2
TTC39C-209ENST00000584250 SAMD11Q96NU1 681 aa27.53■■■□□ 2
TTC39C-209ENST00000584250 TRAIPQ9BWF2 469 aa27.53■■■□□ 2
TTC39C-209ENST00000584250 EIF2AQ9BY44 585 aaKnown RBP27.53■■■□□ 2
TTC39C-209ENST00000584250 NFKBIZQ9BYH8 718 aa27.53■■■□□ 2
TTC39C-209ENST00000584250 TYW1Q9NV66 732 aaKnown RBP27.53■■■□□ 2
TTC39C-209ENST00000584250 H3BNC9 293 aa27.52■■■□□ 2
TTC39C-209ENST00000584250 HIP1RO75146 1068 aa27.52■■■□□ 2
TTC39C-209ENST00000584250 ERLIN2O94905 339 aa27.52■■■□□ 2
TTC39C-209ENST00000584250 ARF4P18085 180 aaPredicted RBP27.52■■■□□ 2
TTC39C-209ENST00000584250 SLC39A14Q15043 492 aa27.52■■■□□ 2
TTC39C-209ENST00000584250 CDCA2Q69YH5 1023 aaPredicted RBP27.52■■■□□ 2
TTC39C-209ENST00000584250 CDK5RAP3Q96JB5 506 aa27.52■■■□□ 2
TTC39C-209ENST00000584250 TMEM117Q9H0C3 514 aa27.52■■■□□ 2
TTC39C-209ENST00000584250 CWH43Q9H720 699 aa27.52■■■□□ 2
TTC39C-209ENST00000584250 BLOC1S4Q9NUP1 217 aa27.52■■■□□ 2
TTC39C-209ENST00000584250 PCDHB2Q9Y5E7 798 aa27.52■■■□□ 2
TTC39C-209ENST00000584250 SRPRBQ9Y5M8 271 aaKnown RBP27.52■■■□□ 2
TTC39C-209ENST00000584250 NPHP3-ACAD11A0A0J9YXS1 232 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 SFI1A8K8P3 1242 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 C5orf67F2Z3F1 127 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 GRM6O15303 877 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 F13A1P00488 732 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 PLA2G4BP0C869 781 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 PLCG1P19174 1290 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 SLC12A3P55017 1021 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 SYT2Q8N9I0 419 aaPredicted RBP27.51■■□□□ 1.99
TTC39C-209ENST00000584250 NT5C3AQ9H0P0 336 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 ATG2AQ2TAZ0 1938 aa27.51■■□□□ 1.99
TTC39C-209ENST00000584250 GTPBP6O43824 516 aaPredicted RBP27.5■■□□□ 1.99
TTC39C-209ENST00000584250 ZNF623O75123 536 aa27.5■■□□□ 1.99
TTC39C-209ENST00000584250 EOMESO95936 686 aa27.5■■□□□ 1.99
TTC39C-209ENST00000584250 NASPP49321 788 aaPredicted RBP27.5■■□□□ 1.99
TTC39C-209ENST00000584250 SMG8Q8ND04 991 aaKnown RBP27.5■■□□□ 1.99
TTC39C-209ENST00000584250 ALG13Q9NP73 1137 aaKnown RBP27.5■■□□□ 1.99
TTC39C-209ENST00000584250 CSPG5O95196 566 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 LIG1P18858 919 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 NAMPTP43490 491 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 AFF1P51825 1210 aaKnown RBP27.49■■□□□ 1.99
TTC39C-209ENST00000584250 CACNB1Q02641 598 aaPredicted RBP27.49■■□□□ 1.99
TTC39C-209ENST00000584250 DHX8Q14562 1220 aaKnown RBP27.49■■□□□ 1.99
TTC39C-209ENST00000584250 ARSHQ5FYA8 562 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 AGMOQ6ZNB7 445 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 LINC00301Q8NCQ3 95 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 SYMPKQ92797 1274 aaKnown RBP27.49■■□□□ 1.99
TTC39C-209ENST00000584250 KIFAP3Q92845 792 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 CCDC113Q9H0I3 377 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 RNF39Q9H2S5 420 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 FZD8Q9H461 694 aa27.49■■□□□ 1.99
TTC39C-209ENST00000584250 RNF216Q9NWF9 866 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms