RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ZNF668Q96K58 619 aaPredicted RBP11.01□□□□□ -0.65
SKA2-208ENST00000583927 MRPL9Q9BYD2 267 aaKnown RBP11.01□□□□□ -0.65
SKA2-208ENST00000583927 CWH43Q9H720 699 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 MINDY3Q9H8M7 445 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 LZTS1Q9Y250 596 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 PCDHB6Q9Y5E3 794 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 PCDHB12Q9Y5F1 795 aa11.01□□□□□ -0.65
SKA2-208ENST00000583927 TBKBP1A7MCY6 615 aa11□□□□□ -0.65
SKA2-208ENST00000583927 H3BQV1 296 aa11□□□□□ -0.65
SKA2-208ENST00000583927 GRM6O15303 877 aa11□□□□□ -0.65
SKA2-208ENST00000583927 ITGB1P05556 798 aa11□□□□□ -0.65
SKA2-208ENST00000583927 SRGAP2CP0DJJ0 459 aa11□□□□□ -0.65
SKA2-208ENST00000583927 BMP1P13497 986 aa11□□□□□ -0.65
SKA2-208ENST00000583927 LAG3P18627 525 aa11□□□□□ -0.65
SKA2-208ENST00000583927 FGFR4P22455 802 aa11□□□□□ -0.65
SKA2-208ENST00000583927 HOXA11P31270 313 aaPredicted RBP11□□□□□ -0.65
SKA2-208ENST00000583927 GATMP50440 423 aa11□□□□□ -0.65
SKA2-208ENST00000583927 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
SKA2-208ENST00000583927 PLCB3Q01970 1234 aa11□□□□□ -0.65
SKA2-208ENST00000583927 CTC1Q2NKJ3 1217 aa11□□□□□ -0.65
SKA2-208ENST00000583927 PAN2Q504Q3 1202 aaKnown RBP11□□□□□ -0.65
SKA2-208ENST00000583927 CLLU1OSQ5K130 101 aa11□□□□□ -0.65
SKA2-208ENST00000583927 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
SKA2-208ENST00000583927 TWF2Q6IBS0 349 aaKnown RBP11□□□□□ -0.65
SKA2-208ENST00000583927 PDE12Q6L8Q7 609 aaKnown RBP11□□□□□ -0.65
SKA2-208ENST00000583927 BRAPQ7Z569 592 aa11□□□□□ -0.65
SKA2-208ENST00000583927 MRPL10Q7Z7H8 261 aaKnown RBP11□□□□□ -0.65
SKA2-208ENST00000583927 LRRC43Q8N309 656 aa11□□□□□ -0.65
SKA2-208ENST00000583927 KLHL23Q8NBE8 558 aa11□□□□□ -0.65
SKA2-208ENST00000583927 CNNM3Q8NE01 707 aa11□□□□□ -0.65
SKA2-208ENST00000583927 CCDC51Q96ER9 411 aa11□□□□□ -0.65
SKA2-208ENST00000583927 INTS4Q96HW7 963 aaKnown RBP11□□□□□ -0.65
SKA2-208ENST00000583927 CCDC43Q96MW1 224 aaKnown RBP11□□□□□ -0.65
SKA2-208ENST00000583927 FAM105AQ9NUU6 356 aa11□□□□□ -0.65
SKA2-208ENST00000583927 TYW1Q9NV66 732 aaKnown RBP11□□□□□ -0.65
SKA2-208ENST00000583927 LRWD1Q9UFC0 647 aa11□□□□□ -0.65
SKA2-208ENST00000583927 PIN4Q9Y237 131 aaKnown RBP11□□□□□ -0.65
SKA2-208ENST00000583927 ZMYM2Q9UBW7 1377 aa11□□□□□ -0.65
SKA2-208ENST00000583927 MTCL1Q9Y4B5 1905 aaKnown RBP10.99□□□□□ -0.65
SKA2-208ENST00000583927 FSD2A1L4K1 749 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 SLC26A4O43511 780 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 FGFR1P11362 822 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 CYP11B2P19099 503 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 PDCP20941 246 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 GLRA2P23416 452 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 PPM1AP35813 382 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 CAPSQ13938 189 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 NBR1Q14596 966 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 SKIV2LQ15477 1246 aaKnown RBP10.99□□□□□ -0.65
SKA2-208ENST00000583927 FAM187BQ17R55 369 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 HYIQ5T013 277 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 LARP1BQ659C4 914 aaKnown RBP10.99□□□□□ -0.65
SKA2-208ENST00000583927 CDCA2Q69YH5 1023 aaPredicted RBP10.99□□□□□ -0.65
SKA2-208ENST00000583927 MCTP1Q6DN14 999 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 POTEGQ6S5H5 508 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 DTHD1Q6ZMT9 781 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 LRRC55Q6ZSA7 311 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 ABI1Q8IZP0 508 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 COLGALT1Q8NBJ5 622 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 PPP2R3CQ969Q6 453 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 PGBD4Q96DM1 585 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 PABPC5Q96DU9 382 aaKnown RBP10.99□□□□□ -0.65
SKA2-208ENST00000583927 PRIMPOLQ96LW4 560 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 UBE2ZQ9H832 354 aaPredicted RBP10.99□□□□□ -0.65
SKA2-208ENST00000583927 UBN1Q9NPG3 1134 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 CNTNAP2Q9UHC6 1331 aa10.99□□□□□ -0.65
SKA2-208ENST00000583927 PDCD11Q14690 1871 aaKnown RBP10.98□□□□□ -0.65
SKA2-208ENST00000583927 INPPL1O15357 1258 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 BMP15O95972 392 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 NCLP19338 710 aaKnown RBP10.98□□□□□ -0.65
SKA2-208ENST00000583927 KCNA4P22459 653 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 TFF2Q03403 129 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 MBTD1Q05BQ5 628 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 NCBP1Q09161 790 aaKnown RBP10.98□□□□□ -0.65
SKA2-208ENST00000583927 ECM1Q16610 540 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 AMHR2Q16671 573 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 PUS10Q3MIT2 529 aaKnown RBP10.98□□□□□ -0.65
SKA2-208ENST00000583927 LEXMQ3ZCV2 418 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 TCEAL5Q5H9L2 206 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 KRT79Q5XKE5 535 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 NOTUMQ6P988 496 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 ASAP3Q8TDY4 903 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 POF1BQ8WVV4 589 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 AK8Q96MA6 479 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 ALG13Q9NP73 1137 aaKnown RBP10.98□□□□□ -0.65
SKA2-208ENST00000583927 PCDHB2Q9Y5E7 798 aa10.98□□□□□ -0.65
SKA2-208ENST00000583927 ARHGEF35A5YM69 484 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 TSPAN1O60635 241 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 USO1O60763 962 aaKnown RBP10.97□□□□□ -0.65
SKA2-208ENST00000583927 OFD1O75665 1012 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 FGF18O76093 207 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 ERLIN2O94905 339 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 EYA4O95677 639 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 DNAJB1P25685 340 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 CCT6AP40227 531 aaKnown RBP10.97□□□□□ -0.65
SKA2-208ENST00000583927 PPP2R5AQ15172 486 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 IL17AQ16552 155 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 UBXN11Q5T124 520 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 SPOUT1Q5T280 376 aaKnown RBP10.97□□□□□ -0.65
SKA2-208ENST00000583927 PADI6Q6TGC4 694 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms