RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 CWH43Q9H720 699 aa8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 ANO2Q9NQ90 1003 aa8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 ZNF302Q9NR11 478 aa8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 RGS18Q9NS28 235 aa8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 C1orf112Q9NSG2 853 aa8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 TYW1Q9NV66 732 aaKnown RBP8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 RBM28Q9NW13 759 aaKnown RBP8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 BRPF3Q9ULD4 1205 aa8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 ST3GAL5Q9UNP4 418 aa8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 PCDHB12Q9Y5F1 795 aa8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 COL1A2P08123 1366 aa8.85□□□□□ -0.99
SMCHD1-210ENST00000583800 ZBTB42B2RXF5 422 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 FAM86B1E9PN63 330 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 FSCN2O14926 492 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 GPR182O15218 404 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 C22orf31O95567 290 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 FOSP01100 380 aaPredicted RBP8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 VTNP04004 478 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 FAM86B2P0C5J1 330 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 SP100P23497 879 aaPredicted RBP8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 ZNF76P36508 570 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 PBX3P40426 434 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 PLXNA3P51805 1871 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 UBE3AQ05086 875 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 AP3B2Q13367 1082 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 ZNF484Q5JVG2 852 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 JAKMIP3Q5VZ66 844 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 SWSAP1Q6NVH7 229 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 PDXDC2PQ6P474 469 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 SYNE3Q6ZMZ3 975 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 SLC24A5Q71RS6 500 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 PLA2G4DQ86XP0 818 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 SUGP1Q8IWZ8 645 aaKnown RBP8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 CKAP2LQ8IYA6 745 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 SUSD6Q92537 303 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 NEK1Q96PY6 1258 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 TMEM161AQ9NX61 479 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 BARHL2Q9NY43 387 aa8.84□□□□□ -0.99
SMCHD1-210ENST00000583800 IGLV3-22A0A075B6J6 115 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 GOLGA8AA7E2F4 631 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 GOLGA8BA8MQT2 603 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 CFAP99D6REC4 459 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 hCG_1984214I3L0E3 225 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 ADAMTS3O15072 1205 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 DHX15O43143 795 aaKnown RBP8.83□□□□□ -1
SMCHD1-210ENST00000583800 ZBTB43O43298 467 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 GPR32O75388 356 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 ATF7P17544 494 aaPredicted RBP8.83□□□□□ -1
SMCHD1-210ENST00000583800 LAG3P18627 525 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 CDC27P30260 824 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 TECP42680 631 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 CLCN3P51790 818 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 CRYBB1P53674 252 aaPredicted RBP8.83□□□□□ -1
SMCHD1-210ENST00000583800 VCPP55072 806 aaKnown RBP8.83□□□□□ -1
SMCHD1-210ENST00000583800 SIGLEC14Q08ET2 396 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 TCF15Q12870 199 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 ODR4Q5SWX8 454 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 MIS18BP1Q6P0N0 1132 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 LLGL2Q6P1M3 1020 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 SYCE2Q6PIF2 218 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 NIPA1Q7RTP0 329 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 FBXL6Q8N531 539 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 METTL13Q8N6R0 699 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 ZNF713Q8N859 430 aaPredicted RBP8.83□□□□□ -1
SMCHD1-210ENST00000583800 MRPS27Q92552 414 aaKnown RBP8.83□□□□□ -1
SMCHD1-210ENST00000583800 ASIC4Q96FT7 647 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 CDCA3Q99618 268 aaPredicted RBP8.83□□□□□ -1
SMCHD1-210ENST00000583800 TCF25Q9BQ70 676 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 ATP6V0A4Q9HBG4 840 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 ENTPD7Q9NQZ7 604 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 RNF19AQ9NV58 838 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 CDH22Q9UJ99 828 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 NOVA2Q9UNW9 492 aaKnown RBP8.83□□□□□ -1
SMCHD1-210ENST00000583800 DENND4AQ7Z401 1863 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 CACNA1HO95180 2353 aa8.83□□□□□ -1
SMCHD1-210ENST00000583800 KLF18A0A0U1RQI7 1052 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 SOWAHDA6NJG2 315 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 HIDE1A8MVS5 230 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 IPO5O00410 1097 aaKnown RBP8.82□□□□□ -1
SMCHD1-210ENST00000583800 SRGAP2BP0DMP2 458 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 EXOSC10Q01780 885 aaKnown RBP8.82□□□□□ -1
SMCHD1-210ENST00000583800 KCNC3Q14003 757 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 DSC3Q14574 896 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 PTPN21Q16825 1174 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 ADCK5Q3MIX3 580 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 ANKRD54Q6NXT1 300 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 LRRC55Q6ZSA7 311 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 SKAP1Q86WV1 359 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 LRRC43Q8N309 656 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 LRRC71Q8N4P6 559 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 SNIP1Q8TAD8 396 aaKnown RBP8.82□□□□□ -1
SMCHD1-210ENST00000583800 CRYGNQ8WXF5 182 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 ZNF668Q96K58 619 aaPredicted RBP8.82□□□□□ -1
SMCHD1-210ENST00000583800 CASD1Q96PB1 797 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 ZNF577Q9BSK1 485 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 TMEM117Q9H0C3 514 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 S1PR5Q9H228 398 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 ELAC1Q9H777 363 aaKnown RBP8.82□□□□□ -1
SMCHD1-210ENST00000583800 FAM86C1Q9NVL1 165 aa8.82□□□□□ -1
SMCHD1-210ENST00000583800 GABBR1Q9UBS5 961 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms