RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 SPDYE4A6NLX3 237 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 HIDE1A8MVS5 230 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 NT5C1B-RDH14C9J2C7 533 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TBX3O15119 743 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 GAS2O43903 313 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 ERLIN2O94905 339 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 BAG4O95429 457 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 P4HBP07237 508 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 HOXB8P17481 243 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 KRT2P35908 639 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 RFC5P40937 340 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 GIT2Q14161 759 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 LONRF3Q496Y0 759 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 CES5AQ6NT32 575 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TMEM184AQ6ZMB5 413 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 ZNF598Q86UK7 904 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 KSR1Q8IVT5 923 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 SLFN12Q8IYM2 578 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TCP11Q8WWU5 503 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 LPPQ93052 612 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TRAIPQ9BWF2 469 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 GBP3Q9H0R5 595 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 UPF2Q9HAU5 1272 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 AGPAT5Q9NUQ2 364 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 VAV3Q9UKW4 847 aa9.74□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TMEM221A6NGB7 291 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 M0R296 226 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 EML1O00423 815 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 STBD1O95210 358 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 SP100P23497 879 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 YWHABP31946 246 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 AK2P54819 239 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 ANAPC15P60006 121 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 CYP4A11Q02928 519 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 KCNC3Q14003 757 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 EMC2Q15006 297 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 PTPN21Q16825 1174 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 NOMO2Q5JPE7 1267 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TRIM67Q6ZTA4 783 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 OTUD6AQ7L8S5 288 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 SRGAP1Q7Z6B7 1085 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 SUSD6Q92537 303 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 NECTIN4Q96NY8 510 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 CEP89Q96ST8 783 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 MTRQ99707 1265 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 ZBP1Q9H171 429 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TBC1D13Q9NVG8 400 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 DZANK1Q9NVP4 752 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 ORC3Q9UBD5 711 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 NR2E1Q9Y466 385 aa9.73□□□□□ -0.85
CDK5RAP3-229ENST00000583697 C2orf71A6NGG8 1288 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 PFKFB2O60825 505 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 NPEPPSP55786 919 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 ZXDAP98168 799 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 ITIH3Q06033 890 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 SIGLEC14Q08ET2 396 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TRIM29Q14134 588 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 EPHA7Q15375 998 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 C8orf34Q49A92 452 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 XKR9Q5GH70 373 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TMEM173Q86WV6 379 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 C4orf19Q8IY42 314 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 VPS52Q8N1B4 723 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 MRPL43Q8N983 215 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 OXER1Q8TDS5 423 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TMEM143Q96AN5 459 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 PBXIP1Q96AQ6 731 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 DYDC2Q96IM9 177 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 FBXL18Q96ME1 805 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 RIPOR3Q96MK2 946 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 FAM193BQ96PV7 902 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 DHX33Q9H6R0 707 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 ZSWIM4Q9H7M6 989 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 NRDE2Q9H7Z3 1164 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 RSAD1Q9HA92 442 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 IFT122Q9HBG6 1241 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 GJB4Q9NTQ9 266 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 WRAP73Q9P2S5 460 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 STK39Q9UEW8 545 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TPCN1Q9ULQ1 816 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 CNTNAP2Q9UHC6 1331 aa9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 TDRD15B5MCY1 1934 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-229ENST00000583697 MEIS3P2A8K0S8 358 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ASAP2O43150 1006 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NEMFO60524 1076 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CLASP2O75122 1294 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CXCL14O95715 111 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SRGAP2CP0DJJ0 459 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CTSAP10619 480 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 MTHFRP42898 656 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NHLH1Q02575 133 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NCBP1Q09161 790 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 LAMTOR4Q0VGL1 99 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NR5A1Q13285 461 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 TFDP1Q14186 410 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CTTNQ14247 550 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CALCRLQ16602 461 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SYCE2Q6PIF2 218 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 BMP8AQ7Z5Y6 402 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms