RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
CASC3-208ENST00000583649 LILRB5O75023 590 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 N4BP1O75113 896 aaKnown RBP12.59□□□□□ -0.39
CASC3-208ENST00000583649 DDAH1O94760 285 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 PSAPP07602 524 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 ARP10275 920 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 DARSP14868 501 aaKnown RBP12.59□□□□□ -0.39
CASC3-208ENST00000583649 PHKA2P46019 1235 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 SNW1Q13573 536 aaKnown RBP12.59□□□□□ -0.39
CASC3-208ENST00000583649 UBE2SQ16763 222 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 SLC35G1Q2M3R5 365 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 CYB5R4Q7L1T6 521 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 SMAP1Q8IYB5 467 aaPredicted RBP12.59□□□□□ -0.39
CASC3-208ENST00000583649 TMTC2Q8N394 836 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 NCOA7Q8NI08 942 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 RPS6KC1Q96S38 1066 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 MYADMQ96S97 322 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 TMEM175Q9BSA9 504 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 GLT8D2Q9H1C3 349 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 NRDE2Q9H7Z3 1164 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 NRBP2Q9NSY0 501 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 TBC1D22BQ9NU19 505 aa12.59□□□□□ -0.39
CASC3-208ENST00000583649 C2CD2LO14523 706 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 SOD2P04179 222 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 RETP07949 1114 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 CALM1P0DP23 149 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 CALM2P0DP24 149 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 CALM3P0DP25 149 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 GLULP15104 373 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 DNM2P50570 870 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 CLCN3P51790 818 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 CREMQ03060 361 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 SPEM2Q0P670 501 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 HTR4Q13639 388 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 SLC44A4Q53GD3 710 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 NIPA1Q7RTP0 329 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 TRMT1LQ7Z2T5 733 aaKnown RBP12.58□□□□□ -0.4
CASC3-208ENST00000583649 TMEM173Q86WV6 379 aaPredicted RBP12.58□□□□□ -0.4
CASC3-208ENST00000583649 CCDC60Q8IWA6 550 aaPredicted RBP12.58□□□□□ -0.4
CASC3-208ENST00000583649 IER2Q9BTL4 223 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 MYL10Q9BUA6 226 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 ADAMTS10Q9H324 1103 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.58□□□□□ -0.4
CASC3-208ENST00000583649 SAMM50Q9Y512 469 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 MAFBQ9Y5Q3 323 aaPredicted RBP12.58□□□□□ -0.4
CASC3-208ENST00000583649 WDR87Q6ZQQ6 2873 aa12.58□□□□□ -0.4
CASC3-208ENST00000583649 FANCMQ8IYD8 2048 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 FRYLO94915 3013 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 FSHRP23945 695 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 RPS9P46781 194 aaKnown RBP12.57□□□□□ -0.4
CASC3-208ENST00000583649 SLC11A1P49279 550 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 GLUD2P49448 558 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 GPC3P51654 580 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 GPC5P78333 572 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 ITGB3BPQ13352 177 aaPredicted RBP12.57□□□□□ -0.4
CASC3-208ENST00000583649 ZNF746Q6NUN9 644 aaPredicted RBP12.57□□□□□ -0.4
CASC3-208ENST00000583649 CASC1Q6TDU7 716 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 ZNF852Q6ZMS4 543 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 HEATR3Q7Z4Q2 680 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 DDX23Q9BUQ8 820 aaKnown RBP12.57□□□□□ -0.4
CASC3-208ENST00000583649 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 PCDHA10Q9Y5I2 948 aa12.57□□□□□ -0.4
CASC3-208ENST00000583649 CCDC69A6NI79 296 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 ZBTB42B2RXF5 422 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 IPO5O00410 1097 aaKnown RBP12.56□□□□□ -0.4
CASC3-208ENST00000583649 MEIS1O00470 390 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 GAS2O43903 313 aaKnown RBP12.56□□□□□ -0.4
CASC3-208ENST00000583649 LILRB3O75022 631 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 SETQ01105 290 aaPredicted RBP12.56□□□□□ -0.4
CASC3-208ENST00000583649 ZNF654Q8IZM8 581 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 PRKD2Q9BZL6 878 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 NT5C3AQ9H0P0 336 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 LTB4R2Q9NPC1 389 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 UBN1Q9NPG3 1134 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 FAM105AQ9NUU6 356 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 CDH7Q9ULB5 785 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 PIN4Q9Y237 131 aaKnown RBP12.56□□□□□ -0.4
CASC3-208ENST00000583649 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 CNTNAP2Q9UHC6 1331 aa12.56□□□□□ -0.4
CASC3-208ENST00000583649 TEX28O15482 410 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 ZNF623O75123 536 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 LRRN2O75325 713 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 OFD1O75665 1012 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 RFPL2O75678 378 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 CCNE2O96020 404 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 SHC2P98077 582 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 AP3B2Q13367 1082 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 CSRP2Q16527 193 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 PRR23BQ6ZRT6 265 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 PLA2G4DQ86XP0 818 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 LRRC71Q8N4P6 559 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 NELL1Q92832 810 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 ZNF577Q9BSK1 485 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 HERC2P3Q9BVR0 1158 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 DNAJB4Q9UDY4 337 aa12.55□□□□□ -0.4
CASC3-208ENST00000583649 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
CASC3-208ENST00000583649 NRP1O14786 923 aa12.54□□□□□ -0.4
CASC3-208ENST00000583649 PROS1P07225 676 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms