RNA–Protein interactions for RNA: ENST00000581898.5

CUEDC1-210, Transcript of CUE domain containing 1, humanhuman

TSL 5

Gene CUEDC1, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-210ENST00000581898 FAM217BQ9NTX9 383 aaPredicted RBP11.25□□□□□ -0.61
CUEDC1-210ENST00000581898 TBC1D13Q9NVG8 400 aa11.25□□□□□ -0.61
CUEDC1-210ENST00000581898 IGSF9Q9P2J2 1179 aa11.25□□□□□ -0.61
CUEDC1-210ENST00000581898 VPS13AQ96RL7 3174 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 GVINP1Q7Z2Y8 2422 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 OFD1O75665 1012 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 ADD1P35611 737 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 RAB27AP51159 221 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 USP11P51784 963 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 CLCN4P51793 760 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 JAK3P52333 1124 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 FGD1P98174 961 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 PRKCEQ02156 737 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 NONOQ15233 471 aaKnown RBP eCLIP11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 TARBP2Q15633 366 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 LETM2Q2VYF4 491 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 LONRF3Q496Y0 759 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 CWF19L1Q69YN2 538 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 ELMSAN1Q6PJG2 1045 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 C15orf39Q6ZRI6 1047 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 Q6ZUG5 572 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 TMEM173Q86WV6 379 aaPredicted RBP11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 SIX5Q8N196 739 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 BRF1Q92994 677 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 KLHL5Q96PQ7 755 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 NIFKQ9BYG3 293 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 GBP3Q9H0R5 595 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 MRPL17Q9NRX2 175 aaKnown RBP11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 KANSL3Q9P2N6 904 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 WNT16Q9UBV4 365 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 DPP7Q9UHL4 492 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 DUSP12Q9UNI6 340 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 INPP5FQ9Y2H2 1132 aa11.24□□□□□ -0.61
CUEDC1-210ENST00000581898 PLXNA3P51805 1871 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 WDR81Q562E7 1941 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 A0A087WZ62 844 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 MSH4O15457 936 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 GAS7O60861 476 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 HMGB1P09429 215 aaKnown RBP11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 RFX1P22670 979 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 AKAP17AQ02040 695 aaKnown RBP11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 KRT32Q14532 448 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 PTPN14Q15678 1187 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 XKR3Q5GH77 459 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 CYP26C1Q6V0L0 522 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 CATSPER4Q7RTX7 472 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 ZNF410Q86VK4 478 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 RDM1Q8NG50 284 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 URGCPQ8TCY9 931 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 STAMQ92783 540 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 KCNB2Q92953 911 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 LPPQ93052 612 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 FAM193BQ96PV7 902 aaPredicted RBP11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 FDXACB1Q9BRP7 624 aaPredicted RBP11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 FAM105AQ9NUU6 356 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 SUCLA2Q9P2R7 463 aaPredicted RBP11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 PIN4Q9Y237 131 aaKnown RBP11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 SSX2IPQ9Y2D8 614 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 FAN1Q9Y2M0 1017 aa11.23□□□□□ -0.61
CUEDC1-210ENST00000581898 ZNF292O60281 2723 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 IGKV6-21A0A0C4DH24 114 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 DDX11L8A8MPP1 907 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 PRPF3O43395 683 aaKnown RBP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 CHMP2AO43633 222 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 LMNAP02545 664 aaKnown RBP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 SSBP05455 408 aaKnown RBP eCLIP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 CNPP09543 421 aaKnown RBP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 RPS6KB1P23443 525 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 SLC11A1P49279 550 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 EP300Q09472 2414 aaPredicted RBP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 DRP2Q13474 957 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 TSGA10IPQ3SY00 556 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 MTERF2Q49AM1 385 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 LRCH2Q5VUJ6 765 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 ZNF280BQ86YH2 543 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 RHPN2Q8IUC4 686 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 CMASQ8NFW8 434 aaPredicted RBP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 BCL7CQ8WUZ0 217 aaPredicted RBP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 SLC5A5Q92911 643 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 NXPE3Q969Y0 559 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 LENG9Q96B70 501 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 JPH2Q9BR39 696 aaPredicted RBP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 TMEM175Q9BSA9 504 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 TEKT3Q9BXF9 490 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 NCOA5Q9HCD5 579 aaKnown RBP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 DNAJB4Q9UDY4 337 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 SEPT9Q9UHD8 586 aaPredicted RBP11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 PCDHB2Q9Y5E7 798 aa11.22□□□□□ -0.61
CUEDC1-210ENST00000581898 CCDC195A0A1B0GUA6 201 aa11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 LILRB3O75022 631 aa11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 MAFO75444 373 aaPredicted RBP11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 CENPBP07199 599 aaPredicted RBP11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 CFHP08603 1231 aa11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 GBP2P32456 591 aaPredicted RBP11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 TOB2Q14106 344 aaPredicted RBP11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 UGCGQ16739 394 aa11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 MIER3Q7Z3K6 550 aa11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 MRPL10Q7Z7H8 261 aaKnown RBP11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 SLC44A3Q8N4M1 653 aa11.21□□□□□ -0.61
CUEDC1-210ENST00000581898 CCDC148Q8NFR7 591 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms