RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PCDHGC5Q9Y5F6 944 aa23.37■■□□□ 1.33
CCDC42-203ENST00000581598 ASAP2O43150 1006 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 SLITRK3O94933 977 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 ALADP13716 330 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 PLA2G5P39877 138 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 KRT17Q04695 432 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 CLUL1Q15846 466 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 CALCRLQ16602 461 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 DUSP6Q16828 381 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 RBM23Q86U06 439 aaKnown RBP23.36■■□□□ 1.33
CCDC42-203ENST00000581598 HELQQ8TDG4 1101 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 HSD17B14Q9BPX1 270 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 NGRNQ9NPE2 291 aaKnown RBP23.36■■□□□ 1.33
CCDC42-203ENST00000581598 C11orf16Q9NQ32 467 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 AGPAT5Q9NUQ2 364 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 FAM105AQ9NUU6 356 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 LIMCH1Q9UPQ0 1083 aa23.36■■□□□ 1.33
CCDC42-203ENST00000581598 CTTNQ14247 550 aaKnown RBP23.35■■□□□ 1.33
CCDC42-203ENST00000581598 EMC2Q15006 297 aa23.35■■□□□ 1.33
CCDC42-203ENST00000581598 TMEM184AQ6ZMB5 413 aa23.35■■□□□ 1.33
CCDC42-203ENST00000581598 SLC39A11Q8N1S5 342 aa23.35■■□□□ 1.33
CCDC42-203ENST00000581598 PRPF31Q8WWY3 499 aaKnown RBP23.35■■□□□ 1.33
CCDC42-203ENST00000581598 MTMR9Q96QG7 549 aa23.35■■□□□ 1.33
CCDC42-203ENST00000581598 EIF2AK1Q9BQI3 630 aaKnown RBP23.35■■□□□ 1.33
CCDC42-203ENST00000581598 NEMFO60524 1076 aa23.34■■□□□ 1.33
CCDC42-203ENST00000581598 CYP4A11Q02928 519 aa23.34■■□□□ 1.33
CCDC42-203ENST00000581598 LAMTOR4Q0VGL1 99 aa23.34■■□□□ 1.33
CCDC42-203ENST00000581598 KCNC3Q14003 757 aa23.34■■□□□ 1.33
CCDC42-203ENST00000581598 XKR9Q5GH70 373 aa23.34■■□□□ 1.33
CCDC42-203ENST00000581598 FERMT3Q86UX7 667 aa23.34■■□□□ 1.33
CCDC42-203ENST00000581598 TMEM143Q96AN5 459 aa23.34■■□□□ 1.33
CCDC42-203ENST00000581598 TTC12Q9H892 705 aaPredicted RBP23.34■■□□□ 1.33
CCDC42-203ENST00000581598 PCBP1Q15365 356 aaKnown RBP eCLIP23.33■■□□□ 1.33
CCDC42-203ENST00000581598 TPH2Q8IWU9 490 aa23.33■■□□□ 1.33
CCDC42-203ENST00000581598 MTRQ99707 1265 aa23.33■■□□□ 1.33
CCDC42-203ENST00000581598 TCF25Q9BQ70 676 aa23.33■■□□□ 1.33
CCDC42-203ENST00000581598 LLPHQ9BRT6 129 aaKnown RBP23.33■■□□□ 1.33
CCDC42-203ENST00000581598 ANKEF1Q9NU02 776 aa23.33■■□□□ 1.33
CCDC42-203ENST00000581598 BARX2Q9UMQ3 279 aaPredicted RBP23.33■■□□□ 1.33
CCDC42-203ENST00000581598 WNT7AO00755 349 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 PER2O15055 1255 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 ZBTB39O15060 712 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 DCXO43602 365 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 PBX3P40426 434 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 ALDH7A1P49419 539 aaKnown RBP23.32■■□□□ 1.32
CCDC42-203ENST00000581598 POU5F1BQ06416 359 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 MXD4Q14582 209 aaPredicted RBP23.32■■□□□ 1.32
CCDC42-203ENST00000581598 PLPP4Q5VZY2 271 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 GLB1LQ6UWU2 654 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 VN1R2Q8NFZ6 395 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 PGBD4Q96DM1 585 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 MINDY3Q9H8M7 445 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 XPNPEP1Q9NQW7 623 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 ENTPD7Q9NQZ7 604 aa23.32■■□□□ 1.32
CCDC42-203ENST00000581598 ARIH1Q9Y4X5 557 aaPredicted RBP23.32■■□□□ 1.32
CCDC42-203ENST00000581598 SRGAP2CP0DJJ0 459 aa23.31■■□□□ 1.32
CCDC42-203ENST00000581598 SRGAP2BP0DMP2 458 aa23.31■■□□□ 1.32
CCDC42-203ENST00000581598 XRCC6P12956 609 aaKnown RBP eCLIP23.31■■□□□ 1.32
CCDC42-203ENST00000581598 HOXA11P31270 313 aaPredicted RBP23.31■■□□□ 1.32
CCDC42-203ENST00000581598 TXKP42681 527 aa23.31■■□□□ 1.32
CCDC42-203ENST00000581598 BCAR1P56945 870 aa23.31■■□□□ 1.32
CCDC42-203ENST00000581598 SAFBQ15424 915 aaKnown RBP eCLIP23.31■■□□□ 1.32
CCDC42-203ENST00000581598 NOMO2Q5JPE7 1267 aa23.31■■□□□ 1.32
CCDC42-203ENST00000581598 MRPL10Q7Z7H8 261 aaKnown RBP23.31■■□□□ 1.32
CCDC42-203ENST00000581598 IFNLR1Q8IU57 520 aaPredicted RBP23.31■■□□□ 1.32
CCDC42-203ENST00000581598 RNF149Q8NC42 400 aa23.31■■□□□ 1.32
CCDC42-203ENST00000581598 LPPQ93052 612 aa23.31■■□□□ 1.32
CCDC42-203ENST00000581598 PCDHB2Q9Y5E7 798 aa23.31■■□□□ 1.32
CCDC42-203ENST00000581598 OFD1O75665 1012 aa23.3■■□□□ 1.32
CCDC42-203ENST00000581598 DGAT1O75907 488 aa23.3■■□□□ 1.32
CCDC42-203ENST00000581598 PTENP60484 403 aa23.3■■□□□ 1.32
CCDC42-203ENST00000581598 ORC2Q13416 577 aaPredicted RBP23.3■■□□□ 1.32
CCDC42-203ENST00000581598 TMC7Q7Z402 723 aa23.3■■□□□ 1.32
CCDC42-203ENST00000581598 FAM122AQ96E09 287 aa23.3■■□□□ 1.32
CCDC42-203ENST00000581598 ZSCAN31Q96LW9 406 aaPredicted RBP23.3■■□□□ 1.32
CCDC42-203ENST00000581598 TBC1D13Q9NVG8 400 aa23.3■■□□□ 1.32
CCDC42-203ENST00000581598 CNTNAP2Q9UHC6 1331 aa23.3■■□□□ 1.32
CCDC42-203ENST00000581598 MEIS3P2A8K0S8 358 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 HIDE1A8MVS5 230 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 PRR33A8MZF0 331 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 AXLP30530 894 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 FOSBP53539 338 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 SMC1AQ14683 1233 aaKnown RBP23.29■■□□□ 1.32
CCDC42-203ENST00000581598 UBXN11Q5T124 520 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 AGMOQ6ZNB7 445 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 CCDC83Q8IWF9 413 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 MRPL43Q8N983 215 aaKnown RBP23.29■■□□□ 1.32
CCDC42-203ENST00000581598 SUSD6Q92537 303 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 TMEM169Q96HH4 297 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 NRDE2Q9H7Z3 1164 aa23.29■■□□□ 1.32
CCDC42-203ENST00000581598 BMP2KQ9NSY1 1161 aaPredicted RBP23.29■■□□□ 1.32
CCDC42-203ENST00000581598 RBM19Q9Y4C8 960 aaKnown RBP23.29■■□□□ 1.32
CCDC42-203ENST00000581598 USP15Q9Y4E8 981 aaPredicted RBP23.29■■□□□ 1.32
CCDC42-203ENST00000581598 RARRES1P49788 294 aa23.28■■□□□ 1.32
CCDC42-203ENST00000581598 HMGN5P82970 282 aaKnown RBP23.28■■□□□ 1.32
CCDC42-203ENST00000581598 RBM10P98175 930 aaKnown RBP23.28■■□□□ 1.32
CCDC42-203ENST00000581598 TFDP1Q14186 410 aa23.28■■□□□ 1.32
CCDC42-203ENST00000581598 BMS1Q14692 1282 aaKnown RBP23.28■■□□□ 1.32
CCDC42-203ENST00000581598 CNNM3Q8NE01 707 aa23.28■■□□□ 1.32
CCDC42-203ENST00000581598 CCDC51Q96ER9 411 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 458.1 ms