RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 EID1Q9Y6B2 187 aa6.29□□□□□ -1.4
SMCHD1-205ENST00000581383 PRPF6O94906 941 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 MPIG6BO95866 241 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 CLEC2LP0C7M8 214 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 EPHB1P54762 984 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 HHEXQ03014 270 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 USP39Q53GS9 565 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 PRAMEF9Q5VWM5 478 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 LRSAM1Q6UWE0 723 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 ESPNLQ6ZVH7 1005 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 ZBTB46Q86UZ6 589 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 FUBP3Q96I24 572 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 MAML3Q96JK9 1138 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 DPYSL5Q9BPU6 564 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 AMNQ9BXJ7 453 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 GALNT8Q9NY28 637 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 USP36Q9P275 1121 aaKnown RBP6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 OAZ3Q9UMX2 235 aa6.28□□□□□ -1.4
SMCHD1-205ENST00000581383 ELL2O00472 640 aaPredicted RBP6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 H2AFYO75367 372 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 PRLP01236 227 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 CCND1P24385 295 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 GPR3P46089 330 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 RGS3P49796 1198 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 RAB27AP51159 221 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 ALDH6A1Q02252 535 aaKnown RBP6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 MCL1Q07820 350 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 TOP3AQ13472 1001 aaPredicted RBP6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 PCBP2Q15366 365 aaKnown RBP eCLIP6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 RNF151Q2KHN1 245 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 SLFN12LQ6IEE8 588 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 CXorf67Q86X51 503 aaPredicted RBP6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 AMOTL1Q8IY63 956 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 FUKQ8N0W3 1084 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 CHMP4CQ96CF2 233 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 FAXDC2Q96IV6 333 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 WWC2-AS2Q96NR7 200 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 FOXB1Q99853 325 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 TCEAL9Q9UHQ7 104 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 SPEF1Q9Y4P9 236 aa6.27□□□□□ -1.41
SMCHD1-205ENST00000581383 SHTN1A0MZ66 631 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 PRSS38A1L453 326 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 ACO1P21399 889 aaKnown RBP6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 ECE1P42892 770 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 ETV4P43268 484 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 ROM1Q03395 351 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 MYBPC3Q14896 1274 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 CLUL1Q15846 466 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 CT83Q5H943 113 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 CCDC62Q6P9F0 684 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 UNQ6494/PRO21346Q6UXR6 183 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 POLNQ7Z5Q5 900 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 FMNL3Q8IVF7 1028 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 C1orf162Q8NEQ5 155 aaPredicted RBP6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 HOOK2Q96ED9 719 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 ACAP3Q96P50 834 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 MKS1Q9NXB0 559 aa6.26□□□□□ -1.41
SMCHD1-205ENST00000581383 NPIPB8E9PQR5 432 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 ARHGAP6O43182 974 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 AKAP10O43572 662 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 CFBP00751 764 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 ENPP1P22413 925 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 RPS19P39019 145 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 MANFP55145 182 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 IL13RA1P78552 427 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 ADCY2Q08462 1091 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 MOGSQ13724 837 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 KIAA1841Q6NSI8 718 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 USP30Q70CQ3 517 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 CXXC5Q7LFL8 322 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 CALML6Q8TD86 181 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 FERMT2Q96AC1 680 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 EAF2Q96CJ1 260 aaPredicted RBP6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 KIAA1683Q9H0B3 1180 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 CHPF2Q9P2E5 772 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 EDARQ9UNE0 448 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 PPP2R3BQ9Y5P8 575 aa6.25□□□□□ -1.41
SMCHD1-205ENST00000581383 FZD9O00144 591 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 RAD17O75943 681 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 FOXE3Q13461 319 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 LRRC41Q15345 812 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 NFE2Q16621 373 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 FSCN1Q16658 493 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 UGT8Q16880 541 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 ZBTB41Q5SVQ8 909 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 AGBL4Q5VU57 503 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 PNMA8AQ86V59 439 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 SGMS1Q86VZ5 419 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 C1orf210Q8IVY1 113 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 Q8N1X5 172 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 BTBD2Q9BX70 525 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 QRSL1Q9H0R6 528 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 CCM2LQ9NUG4 571 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 DNAJC28Q9NX36 388 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 ZIM2Q9NZV7 527 aa6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 LUC7L2Q9Y383 392 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-205ENST00000581383 ST20-MTHFSA0A0A6YYL1 179 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 A0A0G2JNJ9 132 aa6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 XPOTO43592 962 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-205ENST00000581383 PCDHGA12O60330 932 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms