RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 PROB1E7EW31 1015 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 STBD1O95210 358 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 PDGFBP01127 241 aaPredicted RBP11.54□□□□□ -0.56
GGA3-210ENST00000580799 RARS2Q5T160 578 aaKnown RBP11.54□□□□□ -0.56
GGA3-210ENST00000580799 GALNT17Q6IS24 598 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 CATSPER4Q7RTX7 472 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 TMEM173Q86WV6 379 aaPredicted RBP11.54□□□□□ -0.56
GGA3-210ENST00000580799 RHPN2Q8IUC4 686 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 EXOC8Q8IYI6 725 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 DAGLBQ8NCG7 672 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 PGBD4Q96DM1 585 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 MBOAT7Q96N66 472 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 FAM86C1Q9NVL1 165 aa11.54□□□□□ -0.56
GGA3-210ENST00000580799 DBR1Q9UK59 544 aaKnown RBP11.54□□□□□ -0.56
GGA3-210ENST00000580799 DDX11L8A8MPP1 907 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 DKC1O60832 514 aaKnown RBP eCLIP11.53□□□□□ -0.56
GGA3-210ENST00000580799 OFD1O75665 1012 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 REC8O95072 547 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 DEXIO95424 95 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 TDP2O95551 362 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 GALTP07902 379 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 EPCAMP16422 314 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 PSMC5P62195 406 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 CCT2P78371 535 aaKnown RBP11.53□□□□□ -0.56
GGA3-210ENST00000580799 SSRP1Q08945 709 aaKnown RBP11.53□□□□□ -0.56
GGA3-210ENST00000580799 ANO5Q75V66 913 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 CABP7Q86V35 215 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 BLIDQ8IZY5 108 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 ETNPPLQ8TBG4 499 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 URGCPQ8TCY9 931 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 SLC22A17Q8WUG5 538 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 AUTS2Q8WXX7 1259 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 SLC7A3Q8WY07 619 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 LPPQ93052 612 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 GJA10Q969M2 543 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 ACSF2Q96CM8 615 aaPredicted RBP11.53□□□□□ -0.56
GGA3-210ENST00000580799 NLRP4Q96MN2 994 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 NRDE2Q9H7Z3 1164 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 SFXN1Q9H9B4 322 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 NCOA5Q9HCD5 579 aaKnown RBP11.53□□□□□ -0.56
GGA3-210ENST00000580799 AGPAT5Q9NUQ2 364 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 INPP5FQ9Y2H2 1132 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 PPME1Q9Y570 386 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 CNTNAP2Q9UHC6 1331 aa11.53□□□□□ -0.56
GGA3-210ENST00000580799 TMEM150BA6NC51 233 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 H0Y858 1186 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 M0R2N6 131 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 CPLX1O14810 134 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 ASGR2P07307 311 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 WEE2P0C1S8 567 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 CLCN5P51795 746 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 PPP2R5CQ13362 524 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 NONOQ15233 471 aaKnown RBP eCLIP11.52□□□□□ -0.57
GGA3-210ENST00000580799 PTPN14Q15678 1187 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
GGA3-210ENST00000580799 CPLX2Q6PUV4 134 aaKnown RBP11.52□□□□□ -0.57
GGA3-210ENST00000580799 RUFY3Q7L099 469 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 OTOP3Q7RTS5 596 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 KRT25Q7Z3Z0 450 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 GPR149Q86SP6 731 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 SKAP1Q86WV1 359 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 C12orf76Q8N812 135 aaPredicted RBP11.52□□□□□ -0.57
GGA3-210ENST00000580799 BCL7CQ8WUZ0 217 aaPredicted RBP11.52□□□□□ -0.57
GGA3-210ENST00000580799 ZNF274Q96GC6 653 aaPredicted RBP11.52□□□□□ -0.57
GGA3-210ENST00000580799 FAM20AQ96MK3 541 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 EMILIN2Q9BXX0 1053 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 GBP3Q9H0R5 595 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 MFSD1Q9H3U5 465 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 IFT122Q9HBG6 1241 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 CYP26B1Q9NR63 512 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 KANSL3Q9P2N6 904 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 DNAJB4Q9UDY4 337 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 LIMD1Q9UGP4 676 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 DDX25Q9UHL0 483 aaKnown RBP11.52□□□□□ -0.57
GGA3-210ENST00000580799 PCDHB2Q9Y5E7 798 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 COL4A3BPQ9Y5P4 624 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 PLXNA3P51805 1871 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 USP34Q70CQ2 3546 aa11.52□□□□□ -0.57
GGA3-210ENST00000580799 SPDYE4A6NLX3 237 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 MEIS3P2A8K0S8 358 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 EPB41L2O43491 1005 aaKnown RBP11.51□□□□□ -0.57
GGA3-210ENST00000580799 GAS2O43903 313 aaKnown RBP11.51□□□□□ -0.57
GGA3-210ENST00000580799 ALDH2P05091 517 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 RFC5P40937 340 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 NBL1P41271 181 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 QARSP47897 775 aaKnown RBP11.51□□□□□ -0.57
GGA3-210ENST00000580799 SLC11A1P49279 550 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 PCBP1Q15365 356 aaKnown RBP eCLIP11.51□□□□□ -0.57
GGA3-210ENST00000580799 LONRF3Q496Y0 759 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 ELMSAN1Q6PJG2 1045 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 TMC5Q6UXY8 1006 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 AGMOQ6ZNB7 445 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 C15orf39Q6ZRI6 1047 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 CCDC149Q6ZUS6 474 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 SRGAP1Q7Z6B7 1085 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 MRPL10Q7Z7H8 261 aaKnown RBP11.51□□□□□ -0.57
GGA3-210ENST00000580799 KSR1Q8IVT5 923 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 TMEM105Q8N8V8 129 aa11.51□□□□□ -0.57
GGA3-210ENST00000580799 PSPC1Q8WXF1 523 aaKnown RBP11.51□□□□□ -0.57
GGA3-210ENST00000580799 SNX27Q96L92 541 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms