RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 IGBP1P78318 339 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 BFSP2Q13515 415 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 HIC1Q14526 733 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 MCM6Q14566 821 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 EMC2Q15006 297 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 PTGISQ16647 500 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 KRBA2Q6ZNG9 492 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 HFE2Q6ZVN8 426 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 TRMT1LQ7Z2T5 733 aaKnown RBP13.45□□□□□ -0.26
CCDC84-209ENST00000580556 RPAINQ86UA6 219 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 SERINC5Q86VE9 423 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 GPBP1Q86WP2 473 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 CNNM3Q8NE01 707 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 TRAPPC12Q8WVT3 735 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 TGS1Q96RS0 853 aaKnown RBP13.45□□□□□ -0.26
CCDC84-209ENST00000580556 MTRQ99707 1265 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 C17orf80Q9BSJ5 609 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 RUSC1Q9BVN2 902 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 BMP2KQ9NSY1 1161 aaPredicted RBP13.45□□□□□ -0.26
CCDC84-209ENST00000580556 ODF2LQ9ULJ1 636 aa13.45□□□□□ -0.26
CCDC84-209ENST00000580556 ZNF318Q5VUA4 2279 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 A0A087WWV3 80 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 TREHO43280 583 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 USO1O60763 962 aaKnown RBP13.44□□□□□ -0.26
CCDC84-209ENST00000580556 NBNO60934 754 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 GJB5O95377 273 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 SSBP05455 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC84-209ENST00000580556 TMOD1P28289 359 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 DNM2P50570 870 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 RBL2Q08999 1139 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 PTK7Q13308 1070 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 ARSHQ5FYA8 562 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 DHX38Q92620 1227 aaKnown RBP13.44□□□□□ -0.26
CCDC84-209ENST00000580556 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 DRC1Q96MC2 740 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 C7orf25Q9BPX7 421 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 SH2D3AQ9BRG2 576 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 TRIM9Q9C026 710 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 XPNPEP1Q9NQW7 623 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 SERTAD1Q9UHV2 236 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 HOOK1Q9UJC3 728 aaKnown RBP13.44□□□□□ -0.26
CCDC84-209ENST00000580556 NOD1Q9Y239 953 aa13.44□□□□□ -0.26
CCDC84-209ENST00000580556 MYMKA6NI61 221 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 CDC42EP1Q00587 391 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 IER5Q5VY09 327 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 EFCAB12Q6NXP0 572 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 NME8Q8N427 588 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 GPT2Q8TD30 523 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 PAGE5Q96GU1 130 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 MAP7D2Q96T17 732 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 RAD9AQ99638 391 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 C17orf75Q9HAS0 396 aa13.43□□□□□ -0.26
CCDC84-209ENST00000580556 FRMD3A2A2Y4 597 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 ASAP2O43150 1006 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 ARL2P36404 184 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 ZNF131P52739 623 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 ZNF200P98182 395 aaPredicted RBP13.42□□□□□ -0.26
CCDC84-209ENST00000580556 ZP2Q05996 745 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 MAPK7Q13164 816 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
CCDC84-209ENST00000580556 GIT2Q14161 759 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 MXD4Q14582 209 aaPredicted RBP13.42□□□□□ -0.26
CCDC84-209ENST00000580556 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 CNKSR3Q6P9H4 555 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCDC84-209ENST00000580556 LRRC8DQ7L1W4 858 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 RSPH3Q86UC2 560 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 KIAA0319LQ8IZA0 1049 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 CCDC155Q8N6L0 562 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 METTL13Q8N6R0 699 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 CAGE1Q8TC20 777 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 PSPC1Q8WXF1 523 aaKnown RBP13.42□□□□□ -0.26
CCDC84-209ENST00000580556 DDX12PQ92771 950 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 DNAJC19Q96DA6 116 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 REEP2Q9BRK0 252 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 KCNG1Q9UIX4 513 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 C5orf42Q9H799 3197 aa13.42□□□□□ -0.26
CCDC84-209ENST00000580556 HIP1RO75146 1068 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 CXCL10P02778 98 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 KRT18P05783 430 aaKnown RBP13.41□□□□□ -0.26
CCDC84-209ENST00000580556 SELPP16109 830 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 SCP2P22307 547 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 CLCN3P51790 818 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 POU5F1BQ06416 359 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 DHX8Q14562 1220 aaKnown RBP13.41□□□□□ -0.26
CCDC84-209ENST00000580556 POSTNQ15063 836 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 PPP2R5AQ15172 486 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 TRIM71Q2Q1W2 868 aaKnown RBP13.41□□□□□ -0.26
CCDC84-209ENST00000580556 RUFY4Q6ZNE9 571 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 EP400NLQ6ZTU2 488 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 DAW1Q8N136 415 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 LRRC71Q8N4P6 559 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
CCDC84-209ENST00000580556 SEL1LQ9UBV2 794 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 COL4A3BPQ9Y5P4 624 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 USP34Q70CQ2 3546 aa13.41□□□□□ -0.26
CCDC84-209ENST00000580556 PVALEFA0A1B0GWK0 134 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms