RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 MEIS1O00470 390 aa21.81■■□□□ 1.08
LIMD2-209ENST00000580222 STK25O00506 426 aa21.81■■□□□ 1.08
LIMD2-209ENST00000580222 DHX15O43143 795 aaKnown RBP21.81■■□□□ 1.08
LIMD2-209ENST00000580222 DTNBO60941 627 aa21.81■■□□□ 1.08
LIMD2-209ENST00000580222 CTSAP10619 480 aa21.81■■□□□ 1.08
LIMD2-209ENST00000580222 NLRP11P59045 1033 aaKnown RBP21.81■■□□□ 1.08
LIMD2-209ENST00000580222 CEP55Q53EZ4 464 aa21.81■■□□□ 1.08
LIMD2-209ENST00000580222 TYW1BQ6NUM6 668 aa21.81■■□□□ 1.08
LIMD2-209ENST00000580222 HEATR3Q7Z4Q2 680 aa21.81■■□□□ 1.08
LIMD2-209ENST00000580222 DEXIO95424 95 aa21.8■■□□□ 1.08
LIMD2-209ENST00000580222 DCNP07585 359 aaKnown RBP21.8■■□□□ 1.08
LIMD2-209ENST00000580222 ALDH7A1P49419 539 aaKnown RBP21.8■■□□□ 1.08
LIMD2-209ENST00000580222 PFKFB3Q16875 520 aaPredicted RBP21.8■■□□□ 1.08
LIMD2-209ENST00000580222 CCDC149Q6ZUS6 474 aa21.8■■□□□ 1.08
LIMD2-209ENST00000580222 LINC01465Q8N7H1 131 aa21.8■■□□□ 1.08
LIMD2-209ENST00000580222 TMEM169Q96HH4 297 aa21.8■■□□□ 1.08
LIMD2-209ENST00000580222 LLPHQ9BRT6 129 aaKnown RBP21.8■■□□□ 1.08
LIMD2-209ENST00000580222 ZNF302Q9NR11 478 aa21.8■■□□□ 1.08
LIMD2-209ENST00000580222 DLGAP2Q9P1A6 1054 aa21.8■■□□□ 1.08
LIMD2-209ENST00000580222 A0A0U1RQF3 1178 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 hCG_1984214I3L0E3 225 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 B4GALT3O60512 393 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 JAK2O60674 1132 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 CSDE1O75534 798 aaKnown RBP21.79■■□□□ 1.08
LIMD2-209ENST00000580222 SP9P0CG40 484 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 ZSCAN20P17040 1043 aaPredicted RBP21.79■■□□□ 1.08
LIMD2-209ENST00000580222 RSPO4Q2I0M5 234 aaPredicted RBP21.79■■□□□ 1.08
LIMD2-209ENST00000580222 SPECC1Q5M775 1068 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 FAM160B1Q5W0V3 765 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 WWC2Q6AWC2 1192 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 ZNF713Q8N859 430 aaPredicted RBP21.79■■□□□ 1.08
LIMD2-209ENST00000580222 IGSF21Q96ID5 467 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 ORC3Q9UBD5 711 aaPredicted RBP21.79■■□□□ 1.08
LIMD2-209ENST00000580222 WNT16Q9UBV4 365 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 CA14Q9ULX7 337 aa21.79■■□□□ 1.08
LIMD2-209ENST00000580222 POTEMA6NI47 508 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 EIF4BP23588 611 aaKnown RBP21.78■■□□□ 1.08
LIMD2-209ENST00000580222 NAPAP54920 295 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 PTPN14Q15678 1187 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 LONRF3Q496Y0 759 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 POTEGQ6S5H5 508 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 DDX53Q86TM3 631 aaKnown RBP21.78■■□□□ 1.08
LIMD2-209ENST00000580222 LRRC71Q8N4P6 559 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 SUMF1Q8NBK3 374 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 RUBCNQ92622 972 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 HINFPQ9BQA5 517 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 SFXN1Q9H9B4 322 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 TBC1D17Q9HA65 648 aa21.78■■□□□ 1.08
LIMD2-209ENST00000580222 MEIS3P2A8K0S8 358 aa21.77■■□□□ 1.08
LIMD2-209ENST00000580222 ZC3H11AO75152 810 aaKnown RBP eCLIP21.77■■□□□ 1.08
LIMD2-209ENST00000580222 POLGP54098 1239 aaPredicted RBP21.77■■□□□ 1.08
LIMD2-209ENST00000580222 HMGN5P82970 282 aaKnown RBP21.77■■□□□ 1.08
LIMD2-209ENST00000580222 LETM2Q2VYF4 491 aa21.77■■□□□ 1.08
LIMD2-209ENST00000580222 SLC44A3Q8N4M1 653 aa21.77■■□□□ 1.08
LIMD2-209ENST00000580222 TMEM87AQ8NBN3 555 aa21.77■■□□□ 1.08
LIMD2-209ENST00000580222 WASF1Q92558 559 aa21.77■■□□□ 1.08
LIMD2-209ENST00000580222 LPPQ93052 612 aa21.77■■□□□ 1.08
LIMD2-209ENST00000580222 KLHL5Q96PQ7 755 aa21.77■■□□□ 1.08
LIMD2-209ENST00000580222 NRDE2Q9H7Z3 1164 aa21.77■■□□□ 1.08
LIMD2-209ENST00000580222 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.77■■□□□ 1.08
LIMD2-209ENST00000580222 MAFBQ9Y5Q3 323 aaPredicted RBP21.77■■□□□ 1.08
LIMD2-209ENST00000580222 CHD6Q8TD26 2715 aa21.77■■□□□ 1.07
LIMD2-209ENST00000580222 GALTP07902 379 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 GLULP15104 373 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 CLCN4P51793 760 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 CUL4AQ13619 759 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 BECN1Q14457 450 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 EFCAB12Q6NXP0 572 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 PPP1R18Q6NYC8 613 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 DENND4AQ7Z401 1863 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 CKAP2LQ8IYA6 745 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 MAML2Q8IZL2 1156 aaPredicted RBP21.76■■□□□ 1.07
LIMD2-209ENST00000580222 FAM184AQ8NB25 1140 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 BARHL2Q9NY43 387 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 IGSF9Q9P2J2 1179 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 DNAJB4Q9UDY4 337 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 AKT3Q9Y243 479 aa21.76■■□□□ 1.07
LIMD2-209ENST00000580222 FAM86B1E9PN63 330 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 LILRB3O75022 631 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 LRRN2O75325 713 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 CNPP09543 421 aaKnown RBP21.75■■□□□ 1.07
LIMD2-209ENST00000580222 FAM86B2P0C5J1 330 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 MYBP10242 640 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 DARSP14868 501 aaKnown RBP21.75■■□□□ 1.07
LIMD2-209ENST00000580222 TBC1D8BQ0IIM8 1120 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 BMS1Q14692 1282 aaKnown RBP21.75■■□□□ 1.07
LIMD2-209ENST00000580222 MIS18BP1Q6P0N0 1132 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 ST13P5Q8NFI4 369 aaPredicted RBP21.75■■□□□ 1.07
LIMD2-209ENST00000580222 CCDC148Q8NFR7 591 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 CCDC12Q8WUD4 166 aaPredicted RBP21.75■■□□□ 1.07
LIMD2-209ENST00000580222 BBXQ8WY36 941 aaPredicted RBP21.75■■□□□ 1.07
LIMD2-209ENST00000580222 AIFM3Q96NN9 605 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 MYADMQ96S97 322 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 ANO3Q9BYT9 981 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 VPS54Q9P1Q0 977 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 SMC3Q9UQE7 1217 aa21.75■■□□□ 1.07
LIMD2-209ENST00000580222 SSBP05455 408 aaKnown RBP eCLIP21.74■■□□□ 1.07
LIMD2-209ENST00000580222 HSP90AA1P07900 732 aaKnown RBP21.74■■□□□ 1.07
LIMD2-209ENST00000580222 FDPSP14324 419 aaKnown RBP21.74■■□□□ 1.07
LIMD2-209ENST00000580222 XBP1P17861 261 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms