RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 C12orf56Q8IXR9 622 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 SLC17A8Q8NDX2 589 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 CBWD1Q9BRT8 395 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.39□□□□□ -0.11
CTC1-203ENST00000578240 USP20Q9Y2K6 914 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 LRRIQ4A6NIV6 560 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 TTLL13PA6NNM8 815 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 N4BP3O15049 544 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 PGK1P00558 417 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 KLRC1P26715 233 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 SMTNP53814 917 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 ADAM17P78536 824 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 LAMTOR4Q0VGL1 99 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 MFSD10Q14728 455 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 MAN2A1Q16706 1144 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 KIAA0753Q2KHM9 967 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 IER5Q5VY09 327 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 EFCAB12Q6NXP0 572 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 MTHFD1LQ6UB35 978 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 SLC9A9Q8IVB4 645 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 IFT74Q96LB3 600 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 SUGCTQ9HAC7 445 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 MAGEC2Q9UBF1 373 aaPredicted RBP14.39□□□□□ -0.11
CTC1-203ENST00000578240 PHLPP2Q6ZVD8 1323 aa14.39□□□□□ -0.11
CTC1-203ENST00000578240 RBAK-RBAKDNI3L0D1 243 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 CETN3O15182 167 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 SLC16A3O15427 465 aaKnown RBP14.38□□□□□ -0.11
CTC1-203ENST00000578240 SMIM10L2AP0DMW4 78 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 SMIM10L2BP0DMW5 78 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 PRKCSHP14314 528 aaPredicted RBP14.38□□□□□ -0.11
CTC1-203ENST00000578240 MTIF2P46199 727 aaKnown RBP14.38□□□□□ -0.11
CTC1-203ENST00000578240 PPP2R5AQ15172 486 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 ARMCX5Q6P1M9 558 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 HS2ST1Q7LGA3 356 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 CREBRFQ8IUR6 639 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 PSPC1Q8WXF1 523 aaKnown RBP14.38□□□□□ -0.11
CTC1-203ENST00000578240 HAPLN2Q9GZV7 340 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 TMEM206Q9H813 350 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 PTPN22Q9Y2R2 807 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 ITIH6Q6UXX5 1313 aa14.38□□□□□ -0.11
CTC1-203ENST00000578240 MBLAC1A4D2B0 266 aaPredicted RBP14.37□□□□□ -0.11
CTC1-203ENST00000578240 FGFR1OPO95684 399 aaKnown RBP14.37□□□□□ -0.11
CTC1-203ENST00000578240 GNRH1P01148 92 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 PIGRP01833 764 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 MYL3P08590 195 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 C6orf222P0C671 652 aaPredicted RBP14.37□□□□□ -0.11
CTC1-203ENST00000578240 PSEN2P49810 448 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 CYP2J2P51589 502 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 MLLT1Q03111 559 aaPredicted RBP14.37□□□□□ -0.11
CTC1-203ENST00000578240 GOLGA8FQ08AF8 430 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 GOLGA8DPQ0D2H9 430 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 LRMPQ12912 555 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 CCDC40Q4G0X9 1142 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 SPECC1LQ69YQ0 1117 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 CCSAPQ6IQ19 270 aaPredicted RBP14.37□□□□□ -0.11
CTC1-203ENST00000578240 DRC7Q8IY82 874 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 SYCP3Q8IZU3 236 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 CCDC155Q8N6L0 562 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 ANKRD20A12PQ8NF67 263 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 PXYLP1Q8TE99 480 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 CACTINQ8WUQ7 758 aaKnown RBP14.37□□□□□ -0.11
CTC1-203ENST00000578240 TCP11Q8WWU5 503 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 ZNF668Q96K58 619 aaPredicted RBP14.37□□□□□ -0.11
CTC1-203ENST00000578240 NOC4LQ9BVI4 516 aaKnown RBP14.37□□□□□ -0.11
CTC1-203ENST00000578240 AP5M1Q9H0R1 490 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 SETD4Q9NVD3 440 aa14.37□□□□□ -0.11
CTC1-203ENST00000578240 SUCLA2Q9P2R7 463 aaPredicted RBP14.37□□□□□ -0.11
CTC1-203ENST00000578240 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.37□□□□□ -0.11
CTC1-203ENST00000578240 MSCO60682 206 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 GYPCP04921 128 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 ADRB2P07550 413 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 CNGA1P29973 690 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 KLK7P49862 253 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 MXD4Q14582 209 aaPredicted RBP14.36□□□□□ -0.11
CTC1-203ENST00000578240 VWA3BQ502W6 1294 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 RHPN2Q8IUC4 686 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 RNF149Q8NC42 400 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 GOLGA5Q8TBA6 731 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 SLC35C1Q96A29 364 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 ZNF830Q96NB3 372 aaPredicted RBP14.36□□□□□ -0.11
CTC1-203ENST00000578240 JPH2Q9BR39 696 aaPredicted RBP14.36□□□□□ -0.11
CTC1-203ENST00000578240 MKNK1Q9BUB5 465 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 TTYH3Q9C0H2 523 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 NDST4Q9H3R1 872 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 PCIF1Q9H4Z3 704 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 MINDY3Q9H8M7 445 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 IFT122Q9HBG6 1241 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 HSPBP1Q9NZL4 362 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 IMPACTQ9P2X3 320 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 PTCH2Q9Y6C5 1203 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 A0A1W2PQC6 194 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 RNF225M0QZC1 329 aaPredicted RBP14.36□□□□□ -0.11
CTC1-203ENST00000578240 ABLIM1O14639 778 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 HNRNPDLO14979 420 aaKnown RBP14.36□□□□□ -0.11
CTC1-203ENST00000578240 GNA14O95837 355 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 VTNP04004 478 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 PTMAP06454 111 aaKnown RBP14.36□□□□□ -0.11
CTC1-203ENST00000578240 TPM3P06753 285 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 IQCF3P0C7M6 154 aa14.36□□□□□ -0.11
CTC1-203ENST00000578240 HOXD10P28358 340 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms